RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HINT1P49773 126 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 DAZAP2Q15038 168 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TDRG1Q3Y452 100 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TRAT1Q6PIZ9 186 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 Q6ZSR3 168 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 STPG3Q8N7X2 389 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 ZBTB34Q8NCN2 500 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 BLNKQ8WV28 456 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 FER1L6-AS2Q96M78 137 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TPPP3Q9BW30 176 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 NPVFQ9HCQ7 196 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TMEM106BQ9NUM4 274 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 IL6RP08887 468 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 CDKN1AP38936 164 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 REG1BP48304 166 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 SELENOVP59797 346 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 LCN2P80188 198 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 SPATA45Q537H7 98 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 Q56UQ5 140 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 CENPWQ5EE01 88 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 RBMXL3Q8N7X1 1067 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 TMEM178AQ8NBL3 297 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 H1FXQ92522 213 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 SEPSECSQ9HD40 501 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 MED13LQ71F56 2210 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 SIAH2O43255 324 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 GGCTO75223 188 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 USF1P22415 310 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 FOXF2Q12947 444 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 MIR17HGQ75NE6 70 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 ST6GALNAC3Q8NDV1 305 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 SLC24A4Q8NFF2 622 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 OR5B3Q8NH48 314 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 BCL2L2Q92843 193 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 ARL2-SNX15V9GYD0 113 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 ATG2AQ2TAZ0 1938 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 IGHV3-21A0A0B4J1V1 117 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 F2Z2F3 143 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 PTTG1IPP53801 180 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 UBE2L3P68036 154 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 MRPS11P82912 194 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 ELOVL5Q9NYP7 299 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 TBL2Q9Y4P3 447 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 C15orf62A8K5M9 175 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 MKRN2OSH3BPM6 223 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 CYC1P08574 325 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 BRS3P32247 399 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 MFAP2P55001 183 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 SRSF7Q16629 238 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 KRTCAP3Q53RY4 240 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 ARSJQ5FYB0 599 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 TREML4Q6UXN2 200 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 LHFPL4Q7Z7J7 247 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 WDR83OSQ9Y284 106 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 WIPI2Q9Y4P8 454 aa5.48□□□□□ -1.53
CSDE1-203ENST00000358528 YTHDF2Q9Y5A9 579 aaKnown RBP5.48□□□□□ -1.53
CSDE1-203ENST00000358528 H3BTX0 84 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 J3QR06 171 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 CA2P00918 260 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 IGLV2-14P01704 120 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 PAFAH1B2P68402 229 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 MMDQ15546 238 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 C1orf194Q5T5A4 169 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 ACP7Q6ZNF0 438 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 OR4S2Q8NH73 311 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 COQ2Q96H96 371 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 AGMATQ9BSE5 352 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 COMMD5Q9GZQ3 224 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 NBEAQ8NFP9 2946 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 ACACAQ13085 2346 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 IGKV3D-15A0A087WSY6 115 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 LOC102724200A0A096LPH7 203 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-203ENST00000358528 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 IGHV1-2P23083 117 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 TAS2R45P59539 299 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 UBE2G1P62253 170 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 VAMP3Q15836 100 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 MOB3BQ86TA1 216 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 ST6GALNAC6Q969X2 333 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 SLC35E1Q96K37 410 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 MGST2Q99735 147 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 IL36BQ9NZH7 164 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-203ENST00000358528 COX7A2P2O60397 106 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 CSN3P07498 182 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 NPSP0C0P6 89 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 RAB4AP20338 218 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 TCTAP57738 103 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 IBA57Q5T440 356 aaKnown RBP5.47□□□□□ -1.53
CSDE1-203ENST00000358528 SLC35E4Q6ICL7 350 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 VWA1Q6PCB0 445 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 BEND2Q8NDZ0 799 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 OR2D3Q8NGH3 330 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 RNASEH2CQ8TDP1 164 aaKnown RBP5.47□□□□□ -1.53
CSDE1-203ENST00000358528 GGTLC1Q9BX51 225 aa5.47□□□□□ -1.53
CSDE1-203ENST00000358528 TECRQ9NZ01 308 aaKnown RBP5.47□□□□□ -1.53
CSDE1-203ENST00000358528 EXPH5Q8NEV8 1989 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 AKAP6Q13023 2319 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 C20orf202A1L168 122 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms