RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 ACKR1Q16570 336 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ACSF3Q4G176 576 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 STUMQ69YW2 141 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 BATF2Q8N1L9 274 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 RPP25LQ8N5L8 163 aaKnown RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 DEFB125Q8N687 156 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 GATSQ8NAP1 163 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 C5orf17Q8NAS9 161 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 OR1B1Q8NGR6 318 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 OR51E1Q8TCB6 317 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF524Q96C55 264 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF48Q96MX3 618 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ATP6V0BQ99437 205 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PBOV1Q9GZY1 135 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 GNB4Q9HAV0 340 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NECAP2Q9NVZ3 263 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PLEKHJ1Q9NW61 149 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 FAM206AQ9NX38 181 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PSG11Q9UQ72 335 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 POLR1DQ9Y2S0 133 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 CACNA1DQ01668 2161 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 CABIN1Q9Y6J0 2220 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 FLNCQ14315 2725 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 TRAV26-1A0A087WT03 109 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 MUC21A0A0G2JKD1 596 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 MUC21A0A140T8X8 626 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 A0A1W2PS18 150 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PGPEP1LA6NFU8 196 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NPIPA3F8WFD2 350 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NUDT3O95989 172 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 MT-CO2P00403 227 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SCGB1A1P11684 91 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 AZU1P20160 251 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NPPCP23582 126 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 S100GP29377 79 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 CEACAM3P40198 252 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF83P51522 516 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM267Q0VDI3 215 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PMCHL1Q16048 86 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NNATQ16517 81 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 MUC21Q5SSG8 566 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 LCN12Q6JVE5 192 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 CBLN3Q6UW01 205 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF695Q8IW36 515 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NEUROG1Q92886 237 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SPSB4Q96A44 273 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 GMPPAQ96IJ6 420 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 RCHY1Q96PM5 261 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SPIN2AQ99865 258 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SPIN2BQ9BPZ2 258 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PSMG3Q9BT73 122 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 WDR61Q9GZS3 305 aaKnown RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM222Q9H0R3 208 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM38BQ9NVV0 291 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SELENOKQ9Y6D0 94 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SHANK1Q9Y566 2161 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 MYO7BQ6PIF6 2116 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 A0A1W2PR80 420 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 A1L4Q6 167 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 GAGE10A6NGK3 116 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 NPIPB6E9PJ23 425 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 C17orf112F2Z3M2 114 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 J3QR06 171 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 CDIPTO14735 213 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 MPPED1O15442 326 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 S1PR2O95136 353 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 FSTL3O95633 263 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 CELA3BP08861 270 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 FRMD6-AS1P0C7T7 363 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 GDF1P27539 372 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 GPR6P46095 362 aaPredicted RBP3.34□□□□□ -1.87
CNGA1-201ENST00000358519 IER3P46695 156 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 RAB9AP51151 201 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 FBXW4P57775 412 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 SMAGPQ0VAQ4 97 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 MYBPHQ13203 477 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 OR8B8Q15620 311 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 PSG3Q16557 428 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 HLA-DRB5Q30154 266 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 BVES-AS1Q5T3Y7 98 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 FAM69BQ5VUD6 431 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 Q6ZS49 121 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 BHLHA15Q7RTS1 189 aaPredicted RBP3.34□□□□□ -1.87
CNGA1-201ENST00000358519 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.34□□□□□ -1.87
CNGA1-201ENST00000358519 COMMD2Q86X83 199 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 FAM58AQ8N1B3 248 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 FAM19A2Q8N3H0 131 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 ZADH2Q8N4Q0 377 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 CCDC71LQ8N9Z2 235 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 OR10P1Q8NGE3 313 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.34□□□□□ -1.87
CNGA1-201ENST00000358519 OR5P3Q8WZ94 311 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 BORCS7Q96B45 105 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 NEIL1Q96FI4 390 aaPredicted RBP3.34□□□□□ -1.87
CNGA1-201ENST00000358519 SFRP2Q96HF1 295 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 ABHD14BQ96IU4 210 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 KCNS1Q96KK3 526 aa3.34□□□□□ -1.87
CNGA1-201ENST00000358519 CLEC7AQ9BXN2 247 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms