RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 COMPP49747 757 aaPredicted RBP12.04□□□□□ -0.48
TPM1-206ENST00000358278 TATDN3Q17R31 274 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 C12orf45Q8N5I9 185 aaPredicted RBP12.04□□□□□ -0.48
TPM1-206ENST00000358278 CHPT1Q8WUD6 406 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
TPM1-206ENST00000358278 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 PRNDQ9UKY0 176 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 TMED3Q9Y3Q3 217 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 LINC01548A6NM66 108 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 SNRPGP15A8MWD9 76 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 IFNA21P01568 189 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 OPN1MWP04001 364 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 FGF2P09038 288 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 RPL27AP46776 148 aaKnown RBP12.03□□□□□ -0.48
TPM1-206ENST00000358278 RIPPLY3P57055 190 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
TPM1-206ENST00000358278 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 C10orf55Q5SWW7 151 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
TPM1-206ENST00000358278 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 FKBP11Q9NYL4 201 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 CACNG5Q9UF02 275 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 LINC00527Q9UJ94 153 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 TENM1Q9UKZ4 2725 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 ADAP1O75689 374 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 MYOD1P15172 320 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
TPM1-206ENST00000358278 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 NOL4LQ96MY1 436 aaPredicted RBP12.03□□□□□ -0.48
TPM1-206ENST00000358278 PDCD10Q9BUL8 212 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 FBXO7Q9Y3I1 522 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 OR51B2Q9Y5P1 312 aa12.03□□□□□ -0.48
TPM1-206ENST00000358278 A0A0B4J293 547 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
TPM1-206ENST00000358278 FOXL1Q12952 345 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 ECSCRQ19T08 205 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 SGMS2Q8NHU3 365 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 FYTTD1Q96QD9 318 aaKnown RBP12.02□□□□□ -0.49
TPM1-206ENST00000358278 SPIN2AQ99865 258 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 SPIN2BQ9BPZ2 258 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 C19orf24Q9BVV8 132 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 SERTAD4Q9NUC0 356 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
TPM1-206ENST00000358278 RNF114Q9Y508 228 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 ALG5Q9Y673 324 aa12.02□□□□□ -0.49
TPM1-206ENST00000358278 CLPSL1A2RUU4 121 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 DBX1A6NMT0 343 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 SSNA1O43805 119 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 IGF1P05019 195 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 APELAP0DMC3 54 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 TMEM267Q0VDI3 215 aaPredicted RBP12.01□□□□□ -0.49
TPM1-206ENST00000358278 SMCO1Q147U7 214 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 Q6ZRM9 215 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 STPG2Q8N412 459 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 OR1L8Q8NGR8 309 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 OR5B3Q8NH48 314 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 HINT2Q9BX68 163 aa12.01□□□□□ -0.49
TPM1-206ENST00000358278 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
TPM1-206ENST00000358278 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
TPM1-206ENST00000358278 A0A1B0GUS0 222 aa12□□□□□ -0.49
TPM1-206ENST00000358278 C7orf66A4D0T2 115 aa12□□□□□ -0.49
TPM1-206ENST00000358278 MSGN1A6NI15 193 aa12□□□□□ -0.49
TPM1-206ENST00000358278 IFNA17P01571 189 aa12□□□□□ -0.49
TPM1-206ENST00000358278 ZNF429Q86V71 674 aa12□□□□□ -0.49
TPM1-206ENST00000358278 LFNGQ8NES3 379 aa12□□□□□ -0.49
TPM1-206ENST00000358278 OR1S1Q8NH92 325 aa12□□□□□ -0.49
TPM1-206ENST00000358278 GON7Q9BXV9 100 aa12□□□□□ -0.49
TPM1-206ENST00000358278 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
TPM1-206ENST00000358278 WSB1Q9Y6I7 421 aa12□□□□□ -0.49
TPM1-206ENST00000358278 TRAV41A0A0B4J266 112 aa12□□□□□ -0.49
TPM1-206ENST00000358278 TEX50A0A1B0GTY4 177 aa12□□□□□ -0.49
TPM1-206ENST00000358278 A0A1B0GU03 582 aa12□□□□□ -0.49
TPM1-206ENST00000358278 FAM25EA8MYX2 175 aa12□□□□□ -0.49
TPM1-206ENST00000358278 E7EUB6 86 aa12□□□□□ -0.49
TPM1-206ENST00000358278 G3V318 75 aa12□□□□□ -0.49
TPM1-206ENST00000358278 CCSO14618 274 aa12□□□□□ -0.49
TPM1-206ENST00000358278 ST8SIA3O43173 380 aa12□□□□□ -0.49
TPM1-206ENST00000358278 UNQ5815/PRO19632Q6UWF5 114 aa12□□□□□ -0.49
TPM1-206ENST00000358278 CENPVQ7Z7K6 275 aaPredicted RBP12□□□□□ -0.49
TPM1-206ENST00000358278 COA4Q9NYJ1 87 aa12□□□□□ -0.49
TPM1-206ENST00000358278 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
TPM1-206ENST00000358278 STAB1Q9NY15 2570 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 NXPH3O95157 252 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 TRAPPC2P0DI81 140 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 TRAPPC2BP0DI82 140 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 EGR2P11161 476 aaPredicted RBP11.99□□□□□ -0.49
TPM1-206ENST00000358278 SLC25A6P12236 298 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 CRIP2P52943 208 aaPredicted RBP11.99□□□□□ -0.49
TPM1-206ENST00000358278 HSPE1P61604 102 aaKnown RBP11.99□□□□□ -0.49
TPM1-206ENST00000358278 KLHDC1Q8N7A1 406 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 ZNF580Q9UK33 172 aa11.99□□□□□ -0.49
TPM1-206ENST00000358278 C13orf42A0A1B0GVH6 325 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms