RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
LSS-201ENST00000356396 SLC25A31Q9H0C2 315 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 STRAPQ9Y3F4 350 aaKnown RBP11.23□□□□□ -0.61
LSS-201ENST00000356396 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
LSS-201ENST00000356396 RNASEK-C17orf49H0YIS7 233 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 TNFRSF13BO14836 293 aaPredicted RBP11.23□□□□□ -0.61
LSS-201ENST00000356396 P0C879 139 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 AKR1C8PQ5T2L2 129 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 HIST2H2BDQ6DRA6 164 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 SCGB1C1Q8TD33 95 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 GAL3ST2Q9H3Q3 398 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 FAM212BQ9NTI7 297 aaPredicted RBP11.23□□□□□ -0.61
LSS-201ENST00000356396 LINC00527Q9UJ94 153 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 OR51B2Q9Y5P1 312 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 ARG1P05089 322 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 HNF1AP20823 631 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.613e-9■■■□□ 15.6
LSS-201ENST00000356396 C4orf17Q53FE4 359 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 ASB13Q8WXK3 278 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 UQCC1Q9NVA1 299 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 MRPL36Q9P0J6 103 aaKnown RBP11.22□□□□□ -0.61
LSS-201ENST00000356396 H0YJW9 148 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 IFNA5P01569 189 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 MSMO1Q15800 293 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 BTNL8Q6UX41 500 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 ZNF66Q6ZN08 573 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 Q8N7P7 452 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 GINS3Q9BRX5 216 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 UNC79Q9P2D8 2635 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 TMEM218A2RU14 115 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 H3BTX0 84 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 SNAPC5O75971 98 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 SNRNP70P08621 437 aaKnown RBP11.22□□□□□ -0.61
LSS-201ENST00000356396 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 AREGP15514 252 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 GPR6P46095 362 aaPredicted RBP11.22□□□□□ -0.61
LSS-201ENST00000356396 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
LSS-201ENST00000356396 OR10P1Q8NGE3 313 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 OR4S2Q8NH73 311 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
LSS-201ENST00000356396 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 EFNB3Q15768 340 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 GUK1Q16774 197 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 C11orf71Q6IPW1 123 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 FAM216AQ8WUB2 273 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 SMIM8Q96KF7 97 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 TMEM133Q9H2Q1 129 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 PRELID1Q9Y255 219 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 SORL1Q92673 2214 aa11.21□□□□□ -0.61
LSS-201ENST00000356396 DLX6P56179 175 aa11.21□□□□□ -0.62
LSS-201ENST00000356396 ZNF674Q2M3X9 581 aa11.21□□□□□ -0.62
LSS-201ENST00000356396 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.62
LSS-201ENST00000356396 NABP2Q9BQ15 211 aa11.21□□□□□ -0.62
LSS-201ENST00000356396 ZNF430Q9H8G1 570 aaPredicted RBP11.21□□□□□ -0.62
LSS-201ENST00000356396 INSIG2Q9Y5U4 225 aa11.21□□□□□ -0.62
LSS-201ENST00000356396 PMS2P5A8MQ11 134 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 ZNF727A8MUV8 499 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 TAAR5O14804 337 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 TIMM23O14925 209 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 PLGLAQ15195 96 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 TNXAQ16473 311 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 OR10A7Q8NGE5 316 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 OR8B3Q8NGG8 313 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 OR9G1Q8NH87 305 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
LSS-201ENST00000356396 OR8B2Q96RD0 313 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 GAB2Q9UQC2 676 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 URGCP-MRPS24S4R325 110 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 IGHV4-39P01824 125 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 IGFBP2P18065 325 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 ZNF266Q14584 549 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
LSS-201ENST00000356396 FFAR4Q5NUL3 377 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 LHX4Q969G2 390 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 IL22RA2Q969J5 263 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 PHYHIPLQ96FC7 376 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
LSS-201ENST00000356396 TEX50A0A1B0GTY4 177 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 M0R036 132 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 OR8U8P0C7N1 319 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 PPOXP50336 477 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 DIRC2Q96SL1 478 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
LSS-201ENST00000356396 WDR61Q9GZS3 305 aaKnown RBP11.19□□□□□ -0.62
LSS-201ENST00000356396 IGKV1OR2-108A0A075B7D4 117 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 FOXH1O75593 365 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 PRR31Q5SQ13 230 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 TMEM14EPQ6UXP3 125 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 ZFP82Q8N141 532 aa11.19□□□□□ -0.62
LSS-201ENST00000356396 RCC1LQ96I51 464 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms