RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 SPIN2AQ99865 258 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 SPIN2BQ9BPZ2 258 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 SHPKQ9UHJ6 478 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 TRAV41A0A0B4J266 112 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 PSMB11A5LHX3 300 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
TRIM13-201ENST00000356017 SSBP2P81877 361 aaPredicted RBP12.24□□□□□ -0.45
TRIM13-201ENST00000356017 NDPQ00604 133 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 SLC35G3Q8N808 338 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 COQ8AQ8NI60 647 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 LINC00527Q9UJ94 153 aa12.24□□□□□ -0.45
TRIM13-201ENST00000356017 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
TRIM13-201ENST00000356017 RBMXL2O75526 392 aaKnown RBP12.23□□□□□ -0.45
TRIM13-201ENST00000356017 OR9G9P0C7N8 305 aa12.23□□□□□ -0.45
TRIM13-201ENST00000356017 RPL27AP46776 148 aaKnown RBP12.23□□□□□ -0.45
TRIM13-201ENST00000356017 ANKRD55Q3KP44 614 aa12.23□□□□□ -0.45
TRIM13-201ENST00000356017 OR5B3Q8NH48 314 aa12.23□□□□□ -0.45
TRIM13-201ENST00000356017 PHB2Q99623 299 aa12.23□□□□□ -0.45
TRIM13-201ENST00000356017 MARVELD1Q9BSK0 173 aa12.23□□□□□ -0.45
TRIM13-201ENST00000356017 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
TRIM13-201ENST00000356017 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 MSGN1A6NI15 193 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 C15orf61A6NNL5 157 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 P0C879 139 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 EGR2P11161 476 aaPredicted RBP12.22□□□□□ -0.45
TRIM13-201ENST00000356017 THOC7Q6I9Y2 204 aaKnown RBP12.22□□□□□ -0.45
TRIM13-201ENST00000356017 UNQ5815/PRO19632Q6UWF5 114 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 Q6ZNX1 250 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 C3orf56Q8N813 242 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 LFNGQ8NES3 379 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 TMEM14BQ9NUH8 114 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 FOXA2Q9Y261 457 aaPredicted RBP12.22□□□□□ -0.45
TRIM13-201ENST00000356017 FBXO7Q9Y3I1 522 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 WSB1Q9Y6I7 421 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 INMT-MINDY4F8WBC2 141 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 PRAF2O60831 178 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 IL5P05113 134 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 ECSCRQ19T08 205 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 LYZL2Q7Z4W2 148 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 MINDY2Q8NBR6 621 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 OR4X2Q8NGF9 303 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 OR1L8Q8NGR8 309 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 WIPF2Q8TF74 440 aaPredicted RBP12.22□□□□□ -0.45
TRIM13-201ENST00000356017 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
TRIM13-201ENST00000356017 ZNF257Q9Y2Q1 563 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 NSG2Q9Y328 171 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 TMED3Q9Y3Q3 217 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 OR51B2Q9Y5P1 312 aa12.22□□□□□ -0.45
TRIM13-201ENST00000356017 A0A0B4J293 547 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 G3V318 75 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 DHFRP00374 187 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 PPIFP30405 207 aaKnown RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 OR2B8PP59922 312 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 RGS21Q2M5E4 152 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 ZNF431Q8TF32 576 aaPredicted RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 FYTTD1Q96QD9 318 aaKnown RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 ZNF747Q9BV97 191 aa12.21□□□□□ -0.46
TRIM13-201ENST00000356017 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 GPN1Q9HCN4 374 aaPredicted RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.46
TRIM13-201ENST00000356017 TEX50A0A1B0GTY4 177 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 IGHG4P01861 327 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 OPN1MWP04001 364 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 TRAPPC2P0DI81 140 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 TRAPPC2BP0DI82 140 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 CFHR3Q02985 330 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 NMSQ5H8A3 153 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 C10orf55Q5SWW7 151 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 ZNF329Q86UD4 541 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 COA4Q9NYJ1 87 aa12.2□□□□□ -0.46
TRIM13-201ENST00000356017 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 A0A1B0GU03 582 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 A0A1W2PN81 502 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 IFNA21P01568 189 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 ELANEP08246 267 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 SULT1A3P0DMM9 295 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 SULT1A4P0DMN0 295 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 CHRNA7P36544 502 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
TRIM13-201ENST00000356017 IZUMO4Q1ZYL8 232 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 MRPL41Q8IXM3 137 aaKnown RBP12.19□□□□□ -0.46
TRIM13-201ENST00000356017 OR52B4Q8NGK2 314 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
TRIM13-201ENST00000356017 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms