RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 TIGITQ495A1 244 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 MIR17HGQ75NE6 70 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 KIR2DL5AQ8N109 375 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 SSBP4Q9BWG4 385 aaPredicted RBP11.35□□□□□ -0.59
TRIM4-203ENST00000355947 STRADBQ9C0K7 418 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 SLC35D1Q9NTN3 355 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 TP53TG3Q9ULZ0 132 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 PIGBOS1A0A0B4J2F0 54 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 PCNX2A6NKB5 2137 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 K7EN84 100 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 PDLIM4P50479 330 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 PSG7Q13046 419 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 HELTA6NFD8 242 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 CD24P25063 80 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 GCHFRP30047 84 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 TREML4Q6UXN2 200 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 PPP1R32Q7Z5V6 425 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 SLC35E1Q96K37 410 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 TIMM9Q9Y5J7 89 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 ARL2-SNX15V9GYD0 113 aa11.34□□□□□ -0.59
TRIM4-203ENST00000355947 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
TRIM4-203ENST00000355947 IGFBP2P18065 325 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 LHX2P50458 406 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 OR1C1Q15619 314 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 SAXO1Q8IYX7 474 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 MAFAQ8NHW3 353 aaPredicted RBP11.33□□□□□ -0.6
TRIM4-203ENST00000355947 ZFHX4Q86UP3 3567 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 SPTBN1Q01082 2364 aaKnown RBP11.33□□□□□ -0.6
TRIM4-203ENST00000355947 M0QZ24 198 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 CXorf1O96002 111 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 MLANAQ16655 118 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 FAM201AQ5SY85 155 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 Q6ZS49 121 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 COLCA1Q6ZS62 124 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 STPG3Q8N7X2 389 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 SLC24A4Q8NFF2 622 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 SAP25Q8TEE9 199 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 MGST2Q99735 147 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 NAV3Q8IVL0 2385 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
TRIM4-203ENST00000355947 H3BTX0 84 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 SPINT2O43291 252 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 MPV17P39210 176 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 ZNF331Q9NQX6 463 aaPredicted RBP11.33□□□□□ -0.6
TRIM4-203ENST00000355947 IL36BQ9NZH7 164 aa11.33□□□□□ -0.6
TRIM4-203ENST00000355947 COL4A2P08572 1712 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 LY6G6EA0A0G2JKS1 128 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 TYMSP04818 313 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-203ENST00000355947 APELAP0DMC3 54 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 HOXC12P31275 282 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-203ENST00000355947 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
TRIM4-203ENST00000355947 OR2M7Q8NG81 312 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 CT55Q8WUE5 264 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 TAAR6Q96RI8 345 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 WDR54Q9H977 334 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 U3KQA8 63 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 USF1P22415 310 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-203ENST00000355947 MFAP2P55001 183 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 RAB31Q13636 194 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 IL11RAQ14626 422 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
TRIM4-203ENST00000355947 S1PR3Q99500 378 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 VPS25Q9BRG1 176 aa11.32□□□□□ -0.6
TRIM4-203ENST00000355947 DPRXA6NFQ7 191 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 FAM90A26D6RGX4 464 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 FOXF2Q12947 444 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 Q6ZR03 302 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 SH2D7A6NKC9 451 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-203ENST00000355947 MLNRO43193 412 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 SNAI2O43623 268 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 LINC00310P59036 64 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 SPEM1Q8N4L4 309 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 ZNF355PQ9NSJ1 428 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 LOC102723996A0A087X1L8 192 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-203ENST00000355947 DNPH1O43598 174 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 MT-CO2P00403 227 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 PAX1P15863 534 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 ZNF137PP52743 207 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 BRWD1-AS2P59051 145 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 RHOBP62745 196 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 FOXL1Q12952 345 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms