RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 A0A1W2PRX2 142 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 SCGB1A1P11684 91 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 C1QL2Q7Z5L3 287 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 TRBV20OR9-2A0A075B6H5 130 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 OTX1P32242 354 aaPredicted RBP15.25■□□□□ 0.03
COL18A1-202ENST00000355480 SCN4AP35499 1836 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 RTN4RL2Q86UN3 420 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 POC1AQ8NBT0 407 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 FAM186AA6NE01 2351 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 IGKV1D-43A0A0B4J1Z2 117 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 SIGLEC5O15389 551 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 CEP290O15078 2479 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 TGIF2-C20orf24A0A0A6YYL0 155 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 C9orf106Q8NAJ2 232 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 OR13A1Q8NGR1 328 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 IL6RP08887 468 aaPredicted RBP15.25■□□□□ 0.03
COL18A1-202ENST00000355480 H2BFSP57053 126 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 COPS9Q8WXC6 57 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 ATAD5Q96QE3 1844 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 C7orf71A4D174 169 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 IGLV3-19P01714 112 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 SUMO2P61956 95 aaKnown RBP15.25■□□□□ 0.03
COL18A1-202ENST00000355480 KIAA1644Q3SXP7 199 aa15.25■□□□□ 0.03
COL18A1-202ENST00000355480 GPR183P32249 361 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 PSG7Q13046 419 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 OR10AG1Q8NH19 301 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 ARPC1AQ92747 370 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 IFI27L2Q9H2X8 130 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 KBTBD11-OT1A0A1B0GTJ5 212 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 TGFBR3LH3BV60 316 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 ZNF418Q8TF45 676 aaPredicted RBP15.24■□□□□ 0.03
COL18A1-202ENST00000355480 TMEM70Q9BUB7 260 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 PARLQ9H300 379 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 KIF13BQ9NQT8 1826 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 OR4D5Q8NGN0 318 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 VWCEQ96DN2 955 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 WDYHV1Q96HA8 205 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 IMMP1LQ96LU5 166 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 PUSL1Q8N0Z8 303 aaKnown RBP15.24■□□□□ 0.03
COL18A1-202ENST00000355480 OR1P1Q8NH06 330 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 PMCHL1Q16048 86 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 PAPPA-AS1Q5QFB9 102 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 C21orf62Q9NYP8 219 aa15.24■□□□□ 0.03
COL18A1-202ENST00000355480 ZNFX1Q9P2E3 1918 aaKnown RBP15.23■□□□□ 0.03
COL18A1-202ENST00000355480 OR4A47Q6IF82 309 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-202ENST00000355480 CCDC88CQ9P219 2028 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 C17orf100A8MU93 164 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 CELA3BP08861 270 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 UMODP07911 640 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 C2orf68Q2NKX9 166 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 CENPWQ5EE01 88 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 CLEC19AQ6UXS0 136 aa15.23■□□□□ 0.03
COL18A1-202ENST00000355480 HINT1P49773 126 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-202ENST00000355480 NRN1LQ496H8 165 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 RNASE6Q93091 150 aaKnown RBP15.22■□□□□ 0.03
COL18A1-202ENST00000355480 C1QTNF5Q9BXJ0 243 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 M0R381 172 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 DANCRP0C864 163 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 CA7P43166 264 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 MRPL14Q6P1L8 145 aaKnown RBP15.22■□□□□ 0.03
COL18A1-202ENST00000355480 DUX3Q96PT4 197 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 MRPL20Q9BYC9 149 aaKnown RBP15.22■□□□□ 0.03
COL18A1-202ENST00000355480 PROB1E7EW31 1015 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 MEF2CQ06413 473 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-202ENST00000355480 SFRP2Q96HF1 295 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 TNFRSF18Q9Y5U5 241 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 IGHV3OR16-8A0A075B7F1 116 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 TRAV24A0A0B4J272 114 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 COL5A1-AS1Q5SY13 56 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 NPIPB9F8W1W9 429 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 NPIPB7O75200 414 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 FHITP49789 147 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 TEX45Q8NA69 505 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 OR10S1Q8NGN2 331 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 TMEM101Q96IK0 257 aa15.22■□□□□ 0.03
COL18A1-202ENST00000355480 C17orf98A8MV24 154 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 FABP2P12104 132 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 FOLR2P14207 255 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 ASIPP42127 132 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 CKAP5Q14008 2032 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 NBEAP1P0C6P0 100 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 GCSAMLQ5JQS6 135 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 ZIC4Q8N9L1 334 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 OR13C6PQ8NH95 151 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 EGR1P18146 543 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 HIST1H2BAQ96A08 127 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 MRAP2Q96G30 205 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 MRPS16Q9Y3D3 137 aaKnown RBP15.21■□□□□ 0.03
COL18A1-202ENST00000355480 IGHV3-11P01762 117 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 ERASQ7Z444 233 aa15.21■□□□□ 0.03
COL18A1-202ENST00000355480 ZNF837Q96EG3 531 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-202ENST00000355480 F11RQ9Y624 299 aaKnown RBP15.21■□□□□ 0.03
COL18A1-202ENST00000355480 H7C1H1 209 aa15.21■□□□□ 0.02
COL18A1-202ENST00000355480 NPCDR1Q9BY65 106 aa15.21■□□□□ 0.02
COL18A1-202ENST00000355480 HTN3P15516 51 aa15.2■□□□□ 0.02
COL18A1-202ENST00000355480 TM2D1Q9BX74 207 aa15.2■□□□□ 0.02
COL18A1-202ENST00000355480 LINC00312Q9Y6C7 94 aa15.2■□□□□ 0.02
COL18A1-202ENST00000355480 TRIOBPQ9H2D6 2365 aa15.2■□□□□ 0.02
COL18A1-202ENST00000355480 HLA-DRB1P01911 266 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms