RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 GNG4P50150 75 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 C3AR1Q16581 482 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 TDRG1Q3Y452 100 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 ZNF826PQ6ZT77 177 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 Q8N976 141 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
CAPN9-202ENST00000354537 Q8TCH9 128 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 DDB2Q92466 427 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 SLC35E1Q96K37 410 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 SEPSECSQ9HD40 501 aaKnown RBP9.43□□□□□ -0.9
CAPN9-202ENST00000354537 RAB9BQ9NP90 201 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 USP34Q70CQ2 3546 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 ARHGAP21Q5T5U3 1957 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 IGHV3-43A0A0B4J1X8 118 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 IGHV3-43DP0DP04 118 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 IGHV1-2P23083 117 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 NPY1RP25929 384 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 HSPE1P61604 102 aaKnown RBP9.43□□□□□ -0.9
CAPN9-202ENST00000354537 ARSJQ5FYB0 599 aaPredicted RBP9.43□□□□□ -0.9
CAPN9-202ENST00000354537 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 TMEM136Q6ZRR5 245 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 UBALD2Q8IYN6 164 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 ABHD12Q8N2K0 398 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 OR4S2Q8NH73 311 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 GNB4Q9HAV0 340 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 UQCR10Q9UDW1 63 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 ZFP30Q9Y2G7 519 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
CAPN9-202ENST00000354537 COL27A1Q8IZC6 1860 aaPredicted RBP9.43□□□□□ -0.9
CAPN9-202ENST00000354537 TMEM265A0A087WTH1 108 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 M0R1X1 148 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 ZNF253O75346 499 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 PRDX2P32119 198 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 RAB7AP51149 207 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 LINC00205P59089 165 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 POU2AF1Q16633 256 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 C19orf35Q6ZS72 473 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 RFESDQ8TAC1 157 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 TECRQ9NZ01 308 aaKnown RBP9.42□□□□□ -0.9
CAPN9-202ENST00000354537 GNG12Q9UBI6 72 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 TRGV5A0A0B4J1U4 118 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 MGST3O14880 152 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 IGKV3-15P01624 115 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 LINC00869P0C866 280 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 CD46P15529 392 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
CAPN9-202ENST00000354537 MRPS11P82912 194 aaKnown RBP9.42□□□□□ -0.9
CAPN9-202ENST00000354537 TIGITQ495A1 244 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 PQLC2Q6ZP29 291 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 OR8I2Q8N0Y5 310 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 ST6GALNAC3Q8NDV1 305 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 C1orf162Q8NEQ5 155 aaPredicted RBP9.42□□□□□ -0.9
CAPN9-202ENST00000354537 OR4P4Q8NGL7 312 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 ENY2Q9NPA8 101 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 TMEM14BQ9NUH8 114 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 R4GN57 208 aa9.42□□□□□ -0.9
CAPN9-202ENST00000354537 MED12LQ86YW9 2145 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 DEFB108AA8MXU0 73 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 PATE3B3GLJ2 98 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 AMY1AP04745 511 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 HNF1AP20823 631 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 CFHR2P36980 270 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 PRRX1P54821 245 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 Q6ZT83 130 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 CD177Q8N6Q3 437 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 KLHDC1Q8N7A1 406 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 SSMEM1Q8WWF3 244 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 ADTRPQ96IZ2 230 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 IFI27L2Q9H2X8 130 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 MRPL27Q9P0M9 148 aaKnown RBP9.41□□□□□ -0.9
CAPN9-202ENST00000354537 NAT8BQ9UHF3 227 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 VCANP13611 3396 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 A0A1W2PRE2 83 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 SMIM27A0A1W2PRY6 76 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 C9orf172C9J069 976 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 NPSP0C0P6 89 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 CD33P20138 364 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 LOXL3P58215 753 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 MBNL2Q5VZF2 373 aaKnown RBP9.41□□□□□ -0.9
CAPN9-202ENST00000354537 SPATA31B1PQ5VZV4 182 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 LINC00696Q6ZRV3 163 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 MAFAQ8NHW3 353 aaPredicted RBP9.41□□□□□ -0.9
CAPN9-202ENST00000354537 WIPF2Q8TF74 440 aaPredicted RBP9.41□□□□□ -0.9
CAPN9-202ENST00000354537 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
CAPN9-202ENST00000354537 TBL2Q9Y4P3 447 aaKnown RBP9.41□□□□□ -0.9
CAPN9-202ENST00000354537 A0A1W2PS18 150 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 FOXH1O75593 365 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 CGAP01215 116 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms