RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 A0A0A6YYH2 397 aa8.83□□□□□ -1
RTN3-204ENST00000354497 TMEM272A0A1B0GTI8 110 aa8.83□□□□□ -1
RTN3-204ENST00000354497 A6NJ64 397 aa8.83□□□□□ -1
RTN3-204ENST00000354497 OR5B21A6NL26 309 aa8.83□□□□□ -1
RTN3-204ENST00000354497 SERPINE3A8MV23 424 aa8.83□□□□□ -1
RTN3-204ENST00000354497 CCL24O00175 119 aa8.83□□□□□ -1
RTN3-204ENST00000354497 CA11O75493 328 aa8.83□□□□□ -1
RTN3-204ENST00000354497 GASTP01350 101 aa8.83□□□□□ -1
RTN3-204ENST00000354497 AMY1AP04745 511 aa8.83□□□□□ -1
RTN3-204ENST00000354497 AMY2AP04746 511 aa8.83□□□□□ -1
RTN3-204ENST00000354497 STAG3L3P0CL85 134 aa8.83□□□□□ -1
RTN3-204ENST00000354497 TMEM225BP0DP42 221 aa8.83□□□□□ -1
RTN3-204ENST00000354497 FABP4P15090 132 aa8.83□□□□□ -1
RTN3-204ENST00000354497 UBE2G2P60604 165 aa8.83□□□□□ -1
RTN3-204ENST00000354497 HTD2P86397 168 aa8.83□□□□□ -1
RTN3-204ENST00000354497 DEFB136Q30KP8 78 aa8.83□□□□□ -1
RTN3-204ENST00000354497 TCEANCQ8N8B7 351 aa8.83□□□□□ -1
RTN3-204ENST00000354497 LFNGQ8NES3 379 aa8.83□□□□□ -1
RTN3-204ENST00000354497 OR8B12Q8NGG6 310 aa8.83□□□□□ -1
RTN3-204ENST00000354497 OR5A2Q8NGI9 324 aa8.83□□□□□ -1
RTN3-204ENST00000354497 ACY3Q96HD9 319 aa8.83□□□□□ -1
RTN3-204ENST00000354497 IL4I1Q96RQ9 567 aa8.83□□□□□ -1
RTN3-204ENST00000354497 MIEN1Q9BRT3 115 aa8.83□□□□□ -1
RTN3-204ENST00000354497 SCRT1Q9BWW7 348 aa8.83□□□□□ -1
RTN3-204ENST00000354497 SELENOIQ9C0D9 397 aa8.83□□□□□ -1
RTN3-204ENST00000354497 CYTL1Q9NRR1 136 aa8.83□□□□□ -1
RTN3-204ENST00000354497 SLC22A13Q9Y226 551 aa8.83□□□□□ -1
RTN3-204ENST00000354497 J3KRW8 73 aa8.82□□□□□ -1
RTN3-204ENST00000354497 K7N7A8 449 aa8.82□□□□□ -1
RTN3-204ENST00000354497 MMP23AO75900 390 aa8.82□□□□□ -1
RTN3-204ENST00000354497 ARL6IP5O75915 188 aa8.82□□□□□ -1
RTN3-204ENST00000354497 SCAF4O95104 1147 aaKnown RBP8.82□□□□□ -1
RTN3-204ENST00000354497 GAPDHP04406 335 aaKnown RBP8.82□□□□□ -1
RTN3-204ENST00000354497 OR2T7P0C7T2 308 aa8.82□□□□□ -1
RTN3-204ENST00000354497 CELP19835 753 aa8.82□□□□□ -1
RTN3-204ENST00000354497 PRRX1P54821 245 aa8.82□□□□□ -1
RTN3-204ENST00000354497 SLC35B1P78383 322 aa8.82□□□□□ -1
RTN3-204ENST00000354497 ZNF260Q3ZCT1 412 aa8.82□□□□□ -1
RTN3-204ENST00000354497 OR2G6Q5TZ20 316 aa8.82□□□□□ -1
RTN3-204ENST00000354497 FDX2Q6P4F2 183 aa8.82□□□□□ -1
RTN3-204ENST00000354497 ZNF322Q6U7Q0 402 aaPredicted RBP8.82□□□□□ -1
RTN3-204ENST00000354497 KCTD9Q7L273 389 aa8.82□□□□□ -1
RTN3-204ENST00000354497 TRAPPC6BQ86SZ2 158 aa8.82□□□□□ -1
RTN3-204ENST00000354497 TPRX1Q8N7U7 411 aa8.82□□□□□ -1
RTN3-204ENST00000354497 SLC35G3Q8N808 338 aa8.82□□□□□ -1
RTN3-204ENST00000354497 OR5D18Q8NGL1 313 aa8.82□□□□□ -1
RTN3-204ENST00000354497 OR4P4Q8NGL7 312 aa8.82□□□□□ -1
RTN3-204ENST00000354497 RNF2Q99496 336 aa8.82□□□□□ -1
RTN3-204ENST00000354497 ALKBH7Q9BT30 221 aaPredicted RBP8.82□□□□□ -1
RTN3-204ENST00000354497 PBDC1Q9BVG4 233 aa8.82□□□□□ -1
RTN3-204ENST00000354497 MAGT1Q9H0U3 335 aa8.82□□□□□ -1
RTN3-204ENST00000354497 MED20Q9H944 212 aa8.82□□□□□ -1
RTN3-204ENST00000354497 OR5AC2Q9NZP5 309 aa8.82□□□□□ -1
RTN3-204ENST00000354497 DPM3Q9P2X0 92 aa8.82□□□□□ -1
RTN3-204ENST00000354497 POLDIP2Q9Y2S7 368 aa8.82□□□□□ -1
RTN3-204ENST00000354497 MOB4Q9Y3A3 225 aa8.82□□□□□ -1
RTN3-204ENST00000354497 ETV7Q9Y603 341 aa8.82□□□□□ -1
RTN3-204ENST00000354497 hADV38S2A0JD32 116 aa8.81□□□□□ -1
RTN3-204ENST00000354497 J3QRE1 110 aa8.81□□□□□ -1
RTN3-204ENST00000354497 J3QT63 122 aa8.81□□□□□ -1
RTN3-204ENST00000354497 CALCBP10092 127 aa8.81□□□□□ -1
RTN3-204ENST00000354497 RND2P52198 227 aa8.81□□□□□ -1
RTN3-204ENST00000354497 RPL19P84098 196 aaKnown RBP8.81□□□□□ -1
RTN3-204ENST00000354497 CLINT1Q14677 625 aa8.81□□□□□ -1
RTN3-204ENST00000354497 BSXQ3C1V8 233 aa8.81□□□□□ -1
RTN3-204ENST00000354497 ZNF684Q5T5D7 378 aa8.81□□□□□ -1
RTN3-204ENST00000354497 RPL22L1Q6P5R6 122 aaKnown RBP8.81□□□□□ -1
RTN3-204ENST00000354497 ABHD12Q8N2K0 398 aa8.81□□□□□ -1
RTN3-204ENST00000354497 OR14K1Q8NGZ2 314 aa8.81□□□□□ -1
RTN3-204ENST00000354497 RGP1Q92546 391 aaPredicted RBP8.81□□□□□ -1
RTN3-204ENST00000354497 PIGLQ9Y2B2 252 aa8.81□□□□□ -1
RTN3-204ENST00000354497 TRBV24-1A0A075B6N3 115 aa8.8□□□□□ -1
RTN3-204ENST00000354497 JTBO76095 146 aa8.8□□□□□ -1
RTN3-204ENST00000354497 AMBPP02760 352 aa8.8□□□□□ -1
RTN3-204ENST00000354497 OR10J1P30954 320 aa8.8□□□□□ -1
RTN3-204ENST00000354497 GNRHRP30968 328 aa8.8□□□□□ -1
RTN3-204ENST00000354497 PAX5Q02548 391 aa8.8□□□□□ -1
RTN3-204ENST00000354497 MEF2DQ14814 521 aa8.8□□□□□ -1
RTN3-204ENST00000354497 ELOBQ15370 118 aa8.8□□□□□ -1
RTN3-204ENST00000354497 PRAMEF5Q5TYX0 476 aa8.8□□□□□ -1
RTN3-204ENST00000354497 LCNL1Q6ZST4 164 aa8.8□□□□□ -1
RTN3-204ENST00000354497 TCF23Q7RTU1 214 aa8.8□□□□□ -1
RTN3-204ENST00000354497 OR52I2Q8NH67 350 aa8.8□□□□□ -1
RTN3-204ENST00000354497 TMEM106AQ96A25 262 aa8.8□□□□□ -1
RTN3-204ENST00000354497 AQP10Q96PS8 301 aa8.8□□□□□ -1
RTN3-204ENST00000354497 IMMP2LQ96T52 175 aa8.8□□□□□ -1
RTN3-204ENST00000354497 NMNAT2Q9BZQ4 307 aa8.8□□□□□ -1
RTN3-204ENST00000354497 SLC35B3Q9H1N7 401 aa8.8□□□□□ -1
RTN3-204ENST00000354497 LYRM2Q9NU23 88 aaPredicted RBP8.8□□□□□ -1
RTN3-204ENST00000354497 MTFP1Q9UDX5 166 aa8.8□□□□□ -1
RTN3-204ENST00000354497 PSG11Q9UQ72 335 aa8.8□□□□□ -1
RTN3-204ENST00000354497 TRAV30A0A087WSZ9 112 aa8.8□□□□□ -1
RTN3-204ENST00000354497 RIIAD1A6NNX1 92 aa8.8□□□□□ -1
RTN3-204ENST00000354497 M0R129 80 aa8.8□□□□□ -1
RTN3-204ENST00000354497 SOX14O95416 240 aa8.8□□□□□ -1
RTN3-204ENST00000354497 NRASP01111 189 aa8.8□□□□□ -1
RTN3-204ENST00000354497 ATF1P18846 271 aa8.8□□□□□ -1
RTN3-204ENST00000354497 CEACAM3P40198 252 aa8.8□□□□□ -1
RTN3-204ENST00000354497 MEF2CQ06413 473 aaPredicted RBP8.8□□□□□ -1
RTN3-204ENST00000354497 OR5I1Q13606 314 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms