RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 IGHV2-26A0A0B4J1V2 119 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 PPIAL4CA0A0B4J2A2 164 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 UBE2L5PA0A1B0GUS4 154 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 A0A1W2PPH5 198 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 C22orf46C9J442 243 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 LY6LH3BQJ8 138 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 RRHO14718 337 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 GOSR1O95249 250 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 IGLV2-23P01705 113 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 HBE1P02100 147 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 H2AFB1P0C5Y9 115 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 SAA1P0DJI8 122 aaPredicted RBP5.61□□□□□ -1.51
TRIM55-203ENST00000350034 PPIAL4GP0DN37 164 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 IL3RAP26951 378 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 MC5RP33032 325 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 MTORP42345 2549 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 HCFC1P51610 2035 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 ATP5IP56385 69 aaPredicted RBP5.61□□□□□ -1.51
TRIM55-203ENST00000350034 DLK1P80370 383 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 PRCDQ00LT1 54 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 TLE4Q04727 773 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 PMS2P11Q13670 270 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 DIAPH2-AS1Q14236 149 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 ZNF726P1Q15940 193 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 GUCA2BQ16661 112 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 HLA-DRB5Q30154 266 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 BSXQ3C1V8 233 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM41BQ5BJD5 291 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 SLC25A24Q6NUK1 477 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 ETV3LQ6ZN32 361 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 SVBPQ8N300 66 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 BEND2Q8NDZ0 799 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 OR10X1Q8NGY0 326 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 OR5B3Q8NH48 314 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM167AQ8TBQ9 72 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 LHX4Q969G2 390 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 TIMD4Q96H15 378 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 NARS2Q96I59 477 aaKnown RBP5.61□□□□□ -1.51
TRIM55-203ENST00000350034 CLCC1Q96S66 551 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 CHODLQ9H9P2 273 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 FKBP11Q9NYL4 201 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 WASHC3Q9Y3C0 194 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 OR51B2Q9Y5P1 312 aa5.61□□□□□ -1.51
TRIM55-203ENST00000350034 ADGRG4Q8IZF6 3080 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 TEX50A0A1B0GTY4 177 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 FNDC10F2Z333 226 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 F8W036 122 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 OVOL3O00110 214 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 DNASE2O00115 360 aaPredicted RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 SOX15O60248 233 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 LY6HO94772 140 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 F12P00748 615 aaPredicted RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 IGKV1D-33P01593 117 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 IGKV1-33P01594 117 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 LIPFP07098 398 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 SFTA3P0C7M3 94 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 MYOD1P15172 320 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 CD1BP29016 333 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 LGALS7P47929 136 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 HOXA1P49639 335 aaPredicted RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 RAB13P51153 203 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 PRRX1P54821 245 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 DEFA5Q01523 94 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 MRGPRG-AS1Q2M3A8 158 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 ZNF506Q5JVG8 444 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 TGIF2LXQ8IUE1 241 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 SLC24A4Q8NFF2 622 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 OR4C13Q8NGP0 309 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 IGFBPL1Q8WX77 278 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 FLYWCH2Q96CP2 140 aaKnown RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 RBMXL1Q96E39 390 aaKnown RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 C1orf159Q96HA4 380 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 RCC1LQ96I51 464 aaKnown RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 HARBI1Q96MB7 349 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 PBDC1Q9BVG4 233 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 CLEC7AQ9BXN2 247 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 VSIRQ9H7M9 311 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 HEYLQ9NQ87 328 aaPredicted RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 KPTNQ9Y664 436 aa5.6□□□□□ -1.51
TRIM55-203ENST00000350034 RP1L1Q8IWN7 2480 aaPredicted RBP5.6□□□□□ -1.51
TRIM55-203ENST00000350034 BSNQ9UPA5 3926 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 BOD1L1Q8NFC6 3051 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 hCG_1809904A0A1W2PP81 198 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 A0A1W2PPE2 198 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 A0A1W2PR64 198 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 A0A1W2PRV1 198 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 RBFOX3A6NFN3 312 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 CGB1A6NKQ9 187 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 BUB1B-PAK6H3BSN5 160 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 M0R1W7 72 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 MPDU1O75352 247 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 CA2P00918 260 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 IFNA10P01566 189 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 MBP02144 154 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 CRYGBP07316 175 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 SRP19P09132 144 aaKnown RBP5.59□□□□□ -1.51
TRIM55-203ENST00000350034 FGF7P21781 194 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 USF1P22415 310 aaPredicted RBP5.59□□□□□ -1.51
TRIM55-203ENST00000350034 NPY1RP25929 384 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms