RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 OR2D3Q8NGH3 330 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 POM121L2Q96KW2 1035 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 STAG3L2P0CL84 134 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 STAG3L3P0CL85 134 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 ACP1P24666 158 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 EAF1Q96JC9 268 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-202ENST00000348987 FAM173AQ9BQD7 235 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 TXNDC17Q9BRA2 123 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 TTTY12Q9BZ98 90 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 IGHV2-26A0A0B4J1V2 119 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 C15orf62A8K5M9 175 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 C17orf98A8MV24 154 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 CLDN14O95500 239 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 CA6P23280 308 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 VAMP3Q15836 100 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 MRGPRDQ8TDS7 321 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 BORCS7Q96B45 105 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 C5orf30Q96GV9 206 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 VPS25Q9BRG1 176 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 CLEC7AQ9BXN2 247 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 LINC00470Q9BZP3 86 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 OR2D2Q9H210 308 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 GTF3C1Q12789 2109 aa15.5■□□□□ 0.07
SCARF1-202ENST00000348987 CXorf1O96002 111 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 BRWD1-AS2P59051 145 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 OR1C1Q15619 314 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 MIC13Q5XKP0 118 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 TMEM136Q6ZRR5 245 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 TSKUQ8WUA8 353 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 C12orf49Q9H741 205 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 SS18L1O75177 396 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-202ENST00000348987 TCL1AP56279 114 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 LINC00205P59089 165 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 ZNF718Q3SXZ3 478 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 ABHD17BQ5VST6 288 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 STUMQ69YW2 141 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 TMEM251Q8N6I4 163 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 PRR14LQ5THK1 2151 aa15.49■□□□□ 0.07
SCARF1-202ENST00000348987 A0A1W2PN81 502 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 Q6P435 159 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 CNOT1A5YKK6 2376 aaKnown RBP15.48■□□□□ 0.07
SCARF1-202ENST00000348987 IGLC7A0M8Q6 106 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 S100A7P31151 101 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 FXYD3Q14802 87 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 H2BFWTQ7Z2G1 175 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 OR4F17Q8NGA8 305 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 SPRY4Q9C004 299 aa15.48■□□□□ 0.07
SCARF1-202ENST00000348987 COL27A1Q8IZC6 1860 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-202ENST00000348987 IGHV1-69-2A0A0G2JMI3 117 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 BMPR1BO00238 502 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 PPBPP02775 128 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 CX3CL1P78423 397 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 PDLIM3Q53GG5 364 aaPredicted RBP15.47■□□□□ 0.07
SCARF1-202ENST00000348987 ZNF497Q6ZNH5 498 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 ZNF645Q8N7E2 425 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 RNASE7Q9H1E1 156 aaKnown RBP15.47■□□□□ 0.07
SCARF1-202ENST00000348987 MT-ND6P03923 174 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 LDLRAD2Q5SZI1 272 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 MRPL54Q6P161 138 aaKnown RBP15.47■□□□□ 0.07
SCARF1-202ENST00000348987 WDR73Q6P4I2 378 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 TREML4Q6UXN2 200 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 CACNA1DQ01668 2161 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 OR2H2O95918 312 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 ATP1A1-AS1Q5TC04 95 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 DHRS13Q6UX07 377 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 DOLPP1Q86YN1 238 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 TP73-AS1Q9UF72 201 aa15.47■□□□□ 0.07
SCARF1-202ENST00000348987 PCNX2A6NKB5 2137 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 TNRC6AQ8NDV7 1962 aaKnown RBP15.46■□□□□ 0.07
SCARF1-202ENST00000348987 FOXH1O75593 365 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 RELBQ01201 579 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 SPATA31B1PQ5VZV4 182 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 C19orf35Q6ZS72 473 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 MOB1BQ7L9L4 216 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 ZNF439Q8NDP4 499 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 MGST2Q99735 147 aa15.46■□□□□ 0.07
SCARF1-202ENST00000348987 TRAV30A0A087WSZ9 112 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 REG1AP05451 166 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 SP9P0CG40 484 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 IGLL1P15814 213 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 OPRK1P41145 380 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 Q56UQ5 140 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 SSMEM1Q8WWF3 244 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 SEPSECSQ9HD40 501 aaKnown RBP15.46■□□□□ 0.06
SCARF1-202ENST00000348987 B4GALT7Q9UBV7 327 aa15.46■□□□□ 0.06
SCARF1-202ENST00000348987 C9JCJ5 164 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 GCHFRP30047 84 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 OR5B3Q8NH48 314 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 CDC42EP3Q9UKI2 254 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 TRGV10A0A0A0MS01 117 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 M0R296 226 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 RAB29O14966 203 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 HOXA4Q00056 320 aaPredicted RBP15.45■□□□□ 0.06
SCARF1-202ENST00000348987 PLGLB1Q02325 96 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 SMIM15Q7Z3B0 74 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 GCNT2Q8N0V5 402 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 MUC15Q8N387 334 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 CST9LQ9H4G1 147 aa15.45■□□□□ 0.06
SCARF1-202ENST00000348987 ANKRD30BLA7E2S9 258 aa15.44■□□□□ 0.06
SCARF1-202ENST00000348987 MT-CO3P00414 261 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms