RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 DEFB108AA8MXU0 73 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 RBMXL2O75526 392 aaKnown RBP17.6■□□□□ 0.41
PTPN18-202ENST00000347849 VENTXO95231 258 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 IGHV1-46P01743 117 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 TYMSP04818 313 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 LINC00205P59089 165 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 NUTF2P61970 127 aaKnown RBP17.6■□□□□ 0.41
PTPN18-202ENST00000347849 LTC4SQ16873 150 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 IQCJQ1A5X6 159 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 GBGT1Q8N5D6 347 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 DTD1Q8TEA8 209 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 PLPPR2Q96GM1 343 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 NEU1Q99519 415 aa17.6■□□□□ 0.41
PTPN18-202ENST00000347849 S1PR2O95136 353 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 IL3RAP26951 378 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 TMPRSS3P57727 454 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 UBE2G2P60604 165 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 TRAPPC1Q9Y5R8 145 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 USF3Q68DE3 2245 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 LHBP01229 141 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 BSPH1Q075Z2 132 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 MZT1Q08AG7 82 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 TEX38Q6PEX7 206 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 ZNF645Q8N7E2 425 aa17.59■□□□□ 0.41
PTPN18-202ENST00000347849 A0A1B0GUS0 222 aa17.58■□□□□ 0.41
PTPN18-202ENST00000347849 CFHR2P36980 270 aa17.58■□□□□ 0.41
PTPN18-202ENST00000347849 CST9LP1Q5W188 147 aa17.58■□□□□ 0.41
PTPN18-202ENST00000347849 GCM1Q9NP62 436 aa17.58■□□□□ 0.41
PTPN18-202ENST00000347849 FKBP11Q9NYL4 201 aa17.58■□□□□ 0.41
PTPN18-202ENST00000347849 C17orf98A8MV24 154 aa17.58■□□□□ 0.4
PTPN18-202ENST00000347849 BTNL3Q6UXE8 466 aa17.58■□□□□ 0.4
PTPN18-202ENST00000347849 LINC01551Q86U37 167 aa17.58■□□□□ 0.4
PTPN18-202ENST00000347849 TMEM256Q8N2U0 113 aa17.58■□□□□ 0.4
PTPN18-202ENST00000347849 ELOVL5Q9NYP7 299 aa17.58■□□□□ 0.4
PTPN18-202ENST00000347849 CHD8Q9HCK8 2581 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 PGPEP1LA6NFU8 196 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 C15orf65H3BRN8 121 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 CDC34P49427 236 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-202ENST00000347849 TMEM108Q6UXF1 575 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 DERL1Q9BUN8 251 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 NDUFB4O95168 129 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 P0C879 139 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 BRWD1-AS2P59051 145 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 GNB1P62873 340 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 TNFAIP6P98066 277 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-202ENST00000347849 GCSAMLQ5JQS6 135 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 UTF1Q5T230 341 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 SNHG12Q9BXW3 62 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 CBLN4Q9NTU7 201 aa17.57■□□□□ 0.4
PTPN18-202ENST00000347849 NUPR1O60356 82 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 ATP5G3P48201 142 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 LCN2P80188 198 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 DEFB108BQ8NET1 73 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 TRAV38-1A0A0B4J264 116 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 IGHV3-7P01780 117 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 C1QTNF9P0C862 333 aa17.56■□□□□ 0.4
PTPN18-202ENST00000347849 RPL15P61313 204 aaKnown RBP17.56■□□□□ 0.4
PTPN18-202ENST00000347849 C17orf112F2Z3M2 114 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 ADIPOQQ15848 244 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 DSCAMO60469 2012 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 ERVFC1-1P60608 527 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 RAB4BP61018 213 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 CCL8P80075 99 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 H2BFWTQ7Z2G1 175 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 NUP37Q8NFH4 326 aa17.55■□□□□ 0.4
PTPN18-202ENST00000347849 NBASA2RRP1 2371 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 TRGV8A0A0C4DH27 118 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 EIF4EBP1Q13541 118 aaPredicted RBP17.54■□□□□ 0.4
PTPN18-202ENST00000347849 ZNF114Q8NC26 417 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 NCOR2Q9Y618 2525 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 POLEQ07864 2286 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 PKDREJQ9NTG1 2253 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 GATA4P43694 442 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 EDDM3BP56851 147 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 SELENOVP59797 346 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 FAM90A1Q86YD7 464 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 ZBTB34Q8NCN2 500 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 SGMS2Q8NHU3 365 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 RND1Q92730 232 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 PXMP4Q9Y6I8 212 aa17.54■□□□□ 0.4
PTPN18-202ENST00000347849 G0S2P27469 103 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 CATR1Q13166 79 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 VWC2Q2TAL6 325 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 TCF23Q7RTU1 214 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 CIB3Q96Q77 187 aaPredicted RBP17.53■□□□□ 0.4
PTPN18-202ENST00000347849 IL19Q9UHD0 177 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 POLR3KQ9Y2Y1 108 aaPredicted RBP17.53■□□□□ 0.4
PTPN18-202ENST00000347849 PDE6DO43924 150 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 CASP6P55212 293 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 TMEM144Q7Z5S9 345 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 NEUROG1Q92886 237 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 NINJ1Q92982 152 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 MS4A10Q96PG2 267 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 PSG11Q9UQ72 335 aa17.53■□□□□ 0.4
PTPN18-202ENST00000347849 RNF7Q9UBF6 113 aa17.52■□□□□ 0.4
PTPN18-202ENST00000347849 NAGKQ9UJ70 344 aa17.52■□□□□ 0.4
PTPN18-202ENST00000347849 A0A1W2PPV4 95 aa17.52■□□□□ 0.39
PTPN18-202ENST00000347849 MGST3O14880 152 aa17.52■□□□□ 0.39
PTPN18-202ENST00000347849 CLDN14O95500 239 aa17.52■□□□□ 0.39
PTPN18-202ENST00000347849 CD33P20138 364 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms