RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF708P17019 499 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 M0R381 172 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 DANCRP0C864 163 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 KIAA0100Q14667 2235 aaKnown RBP19.56■□□□□ 0.72
NPAS3-201ENST00000346562 RRHO14718 337 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 WDR82Q6UXN9 313 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 NPFFR1Q9GZQ6 430 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 DLEC1Q9Y238 1755 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 KBTBD11-OT1A0A1B0GTJ5 212 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 OR11H12B2RN74 326 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 GPR183P32249 361 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 OR11H1Q8NG94 326 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 OR11H2Q8NH07 326 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 TRIP11Q15643 1979 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 CELA3AP09093 270 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 CLEC19AQ6UXS0 136 aa19.56■□□□□ 0.72
NPAS3-201ENST00000346562 BEX4Q9NWD9 120 aaPredicted RBP19.56■□□□□ 0.72
NPAS3-201ENST00000346562 ADAMTSL1Q8N6G6 1762 aa19.55■□□□□ 0.72
NPAS3-201ENST00000346562 CD200R1LQ6Q8B3 271 aa19.55■□□□□ 0.72
NPAS3-201ENST00000346562 KLF4O43474 513 aa19.55■□□□□ 0.72
NPAS3-201ENST00000346562 LEPP41159 167 aa19.55■□□□□ 0.72
NPAS3-201ENST00000346562 C2orf68Q2NKX9 166 aa19.55■□□□□ 0.72
NPAS3-201ENST00000346562 TRPM6Q9BX84 2022 aa19.55■□□□□ 0.72
NPAS3-201ENST00000346562 RNASE4P34096 147 aaKnown RBP19.55■□□□□ 0.72
NPAS3-201ENST00000346562 GPX4P36969 197 aaPredicted RBP19.55■□□□□ 0.72
NPAS3-201ENST00000346562 TRGV2A0A075B6R0 118 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 HTN3P15516 51 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 THSD7AQ9UPZ6 1657 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 IGHV3-49A0A0A0MS15 119 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 PIN1P1O15428 100 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 MYOD1P15172 320 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 RNASE6Q93091 150 aaKnown RBP19.54■□□□□ 0.72
NPAS3-201ENST00000346562 NPCDR1Q9BY65 106 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 TMEM160Q9NX00 188 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 C12orf77C9JDV5 145 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 ZNF638Q14966 1978 aaKnown RBP19.54■□□□□ 0.72
NPAS3-201ENST00000346562 TTC32Q5I0X7 151 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 FAM216BQ8N7L0 139 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 LINC00312Q9Y6C7 94 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
NPAS3-201ENST00000346562 GCM2O75603 506 aaPredicted RBP19.54■□□□□ 0.72
NPAS3-201ENST00000346562 COLCA1Q6ZS62 124 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 WFDC6Q9BQY6 131 aa19.54■□□□□ 0.72
NPAS3-201ENST00000346562 MARVELD3Q96A59 401 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 RBMY1BA6NDE4 496 aaKnown RBP19.53■□□□□ 0.72
NPAS3-201ENST00000346562 RBMY1EA6NEQ0 496 aaKnown RBP19.53■□□□□ 0.72
NPAS3-201ENST00000346562 NMBP08949 121 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 RBMY1DP0C7P1 496 aaKnown RBP19.53■□□□□ 0.72
NPAS3-201ENST00000346562 RBMY1A1P0DJD3 496 aaKnown RBP19.53■□□□□ 0.72
NPAS3-201ENST00000346562 RBMY1CP0DJD4 496 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 ZNF414Q96IQ9 312 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 NBEAP1P0C6P0 100 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 EGR4Q05215 589 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 TSPAN13O95857 204 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 LINC01590Q5TEZ4 76 aa19.53■□□□□ 0.72
NPAS3-201ENST00000346562 ZNF385CQ66K41 422 aaPredicted RBP19.53■□□□□ 0.72
NPAS3-201ENST00000346562 RGPD3A6NKT7 1758 aaPredicted RBP19.52■□□□□ 0.72
NPAS3-201ENST00000346562 TDGF1P13385 188 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 STHQ8IWL8 128 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 S4R3C0 116 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 BIVMQ86UB2 503 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 RNASEH2CQ8TDP1 164 aaKnown RBP19.52■□□□□ 0.72
NPAS3-201ENST00000346562 RPRMQ9NS64 109 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 SMIM13P0DJ93 91 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 OR11H4Q8NGC9 324 aa19.52■□□□□ 0.72
NPAS3-201ENST00000346562 A0A1B0GW15 77 aa19.52■□□□□ 0.71
NPAS3-201ENST00000346562 VENTXO95231 258 aa19.52■□□□□ 0.71
NPAS3-201ENST00000346562 PRSS22Q9GZN4 317 aa19.52■□□□□ 0.71
NPAS3-201ENST00000346562 CBLN4Q9NTU7 201 aa19.52■□□□□ 0.71
NPAS3-201ENST00000346562 MRPS18CQ9Y3D5 142 aaKnown RBP19.52■□□□□ 0.71
NPAS3-201ENST00000346562 LY75O60449 1722 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 APCDD1LQ8NCL9 501 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 ATP5LO75964 103 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 HOXA5P20719 270 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 FBLIM1Q8WUP2 373 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 SCGB3A1Q96QR1 104 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 MRPL20Q9BYC9 149 aaKnown RBP19.51■□□□□ 0.71
NPAS3-201ENST00000346562 TM2D1Q9BX74 207 aa19.51■□□□□ 0.71
NPAS3-201ENST00000346562 IGHV1-2P23083 117 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 KIAA1644Q3SXP7 199 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 TCF23Q7RTU1 214 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 C17orf100A8MU93 164 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 MALP21145 153 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 PUSL1Q8N0Z8 303 aaKnown RBP19.5■□□□□ 0.71
NPAS3-201ENST00000346562 C1QTNF5Q9BXJ0 243 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 COL24A1Q17RW2 1714 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 PEX7O00628 323 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 CNTFRP26992 372 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 AKIRIN1Q9H9L7 192 aaPredicted RBP19.5■□□□□ 0.71
NPAS3-201ENST00000346562 IQCF6A8MYZ5 107 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 OR13A1Q8NGR1 328 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 PGPEP1Q9NXJ5 209 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 JKAMPQ9P055 326 aa19.5■□□□□ 0.71
NPAS3-201ENST00000346562 SOX21Q9Y651 276 aaPredicted RBP19.5■□□□□ 0.71
NPAS3-201ENST00000346562 MYO16Q9Y6X6 1858 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 IGFBP2P18065 325 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 FAM209BQ5JX69 171 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 CDKN1AP38936 164 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 BEND2Q8NDZ0 799 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 ZNF815PA8K554 130 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms