RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SPP1P10451 314 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 SLC38A11Q08AI6 406 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 ATP6V1FQ16864 119 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 OR8G2PQ6IF36 304 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 HSD17B11Q8NBQ5 300 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 OR10P1Q8NGE3 313 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 PINX1Q96BK5 328 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 RITA1Q96K30 269 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 COMMD5Q9GZQ3 224 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 PMS2P5A8MQ11 134 aa17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 FGF16O43320 207 aa17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 IFNA10P01566 189 aa17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 MYOD1P15172 320 aa17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 HABP2Q14520 560 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 PSMG3-AS1Q96PY0 264 aa17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 PLEKHA3Q9HB20 300 aa17.28■□□□□ 0.36
TSPAN3-202ENST00000346495 VENTXO95231 258 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 OR8U8P0C7N1 319 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 SULT1A2P50226 295 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 SLC25A24Q6NUK1 477 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 LRRC75A-AS1Q8N1F1 130 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 OR1L8Q8NGR8 309 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 CFHR4Q92496 578 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 GNPNAT1Q96EK6 184 aaPredicted RBP17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 HINT2Q9BX68 163 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 AUP1Q9Y679 476 aa17.27■□□□□ 0.36
TSPAN3-202ENST00000346495 LRRK2Q5S007 2527 aa17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 FAM157CP0CG43 387 aa17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 PSG5Q15238 335 aa17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 DEFB113Q30KQ7 82 aa17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 CXorf58Q96LI9 332 aa17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 ZNF430Q9H8G1 570 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 MED9Q9NWA0 146 aa17.26■□□□□ 0.35
TSPAN3-202ENST00000346495 CRYGBP07316 175 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 ATP6V0CP27449 155 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 RAB11AP62491 216 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 SSX2Q16385 188 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 SCGB1C1Q8TD33 95 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 MALSU1Q96EH3 234 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 PARD6GQ9BYG4 376 aaPredicted RBP17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 UTP20O75691 2785 aaKnown RBP17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 CHD6Q8TD26 2715 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 OPN1MWP04001 364 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 MSMBP08118 114 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 OPN1MW2P0DN77 364 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 OPN1MW3P0DN78 364 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 F2RL1P55085 397 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 COMMD7Q86VX2 200 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 THNSL2Q86YJ6 484 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 MMD2Q8IY49 270 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 SLC24A4Q8NFF2 622 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 TMEM147Q9BVK8 224 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 SH3BGRL3Q9H299 93 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 NDUFA4L2Q9NRX3 87 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 PFDN2Q9UHV9 154 aa17.25■□□□□ 0.35
TSPAN3-202ENST00000346495 NPY1RP25929 384 aa17.24■□□□□ 0.35
TSPAN3-202ENST00000346495 CNTFRP26992 372 aa17.24■□□□□ 0.35
TSPAN3-202ENST00000346495 ATP5IP56385 69 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-202ENST00000346495 SAT2Q96F10 170 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-202ENST00000346495 SIGLEC9Q9Y336 463 aa17.24■□□□□ 0.35
TSPAN3-202ENST00000346495 A0A1W2PN81 502 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 ZNF705EA8MWA4 302 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 B4DSR2 109 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 INS-IGF2F8WCM5 200 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 RRHO14718 337 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 MOSP00540 346 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 S100A1P23297 94 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 MAS1LP35410 378 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 CHRNA7P36544 502 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 RAB5CP51148 216 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 PRSS8Q16651 343 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 LRRC75BQ2VPJ9 315 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 ETV3LQ6ZN32 361 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 C1orf159Q96HA4 380 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 TPSG1Q9NRR2 321 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 PLA2G2EQ9NZK7 142 aa17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 METTL1Q9UBP6 276 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-202ENST00000346495 NPFFO15130 113 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 IGKV1D-33P01593 117 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 IGKV1-33P01594 117 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 MRGPRG-AS1Q2M3A8 158 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 DYNAPQ8N1N2 210 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 OR2G3Q8NGZ4 309 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 OR2T10Q8NGZ9 312 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 UQCC1Q9NVA1 299 aa17.22■□□□□ 0.35
TSPAN3-202ENST00000346495 CENPVL3A0A0U1RRI6 287 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 UBE2L5PA0A1B0GUS4 154 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 BLOC1S1P78537 153 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 VWC2Q2TAL6 325 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 PPP1R27Q86WC6 154 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 CITED4Q96RK1 184 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 GGACTQ9BVM4 153 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 WDR61Q9GZS3 305 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 ACTL6BO94805 426 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 CA2P00918 260 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 IFNA4P05014 189 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 SAA4P35542 130 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 ERHP84090 104 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 RUNX1Q01196 453 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 PJVKQ0ZLH3 352 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms