RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RBMXL2O75526 392 aaKnown RBP9.31□□□□□ -0.92
SNCA-202ENST00000345009 CDS2O95674 445 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 OR5AC1P0C628 307 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 UCP1P25874 307 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 G6PCP35575 357 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 CCR6P51684 374 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 AKR1C2P52895 323 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 CRIP2P52943 208 aaPredicted RBP9.31□□□□□ -0.92
SNCA-202ENST00000345009 FOXE3Q13461 319 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 SP6Q3SY56 376 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 SLC25A42Q86VD7 318 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 FAM219AQ8IW50 185 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 LFNGQ8NES3 379 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 OR5M8Q8NGP6 311 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 OR4A16Q8NH70 328 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 GALNT14Q96FL9 552 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 TP53RKQ96S44 253 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 ZFP57Q9NU63 452 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 CACFD1Q9UGQ2 172 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 PRNDQ9UKY0 176 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 FOXA2Q9Y261 457 aaPredicted RBP9.31□□□□□ -0.92
SNCA-202ENST00000345009 MSGN1A6NI15 193 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 PLA2G10O15496 165 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 IGHG4P01861 327 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 RPL27AP46776 148 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 ASAH1Q13510 395 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 KHDC1LQ5JSQ8 128 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 THOC7Q6I9Y2 204 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 HSD17B13Q7Z5P4 300 aaPredicted RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 LGI3Q8N145 548 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 C11orf44Q8N8P7 122 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 MINDY2Q8NBR6 621 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 WIPF2Q8TF74 440 aaPredicted RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 SRSF12Q8WXF0 261 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 RBPMSQ93062 196 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 IL22RA2Q969J5 263 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 SEC22AQ96IW7 307 aa9.3□□□□□ -0.92
SNCA-202ENST00000345009 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
SNCA-202ENST00000345009 A0A1W2PN81 502 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 G3V318 75 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 H3BUA1 57 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 ARPC1BO15143 372 aaKnown RBP9.29□□□□□ -0.92
SNCA-202ENST00000345009 CYB5BO43169 146 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 DHFRP00374 187 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 IL6RP08887 468 aaPredicted RBP9.29□□□□□ -0.92
SNCA-202ENST00000345009 CD28P10747 220 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 VAMP1P23763 118 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 SLC6A1P30531 599 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 CHRNA7P36544 502 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 CD83Q01151 205 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 TMEM268Q5VZI3 342 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 OR5B3Q8NH48 314 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 GLYATL2Q8WU03 294 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 FYTTD1Q96QD9 318 aaKnown RBP9.29□□□□□ -0.92
SNCA-202ENST00000345009 SRSF8Q9BRL6 282 aaKnown RBP9.29□□□□□ -0.92
SNCA-202ENST00000345009 FAM103A1Q9BTL3 118 aaKnown RBP9.29□□□□□ -0.92
SNCA-202ENST00000345009 SLA2Q9H6Q3 261 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 ZNF355PQ9NSJ1 428 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
SNCA-202ENST00000345009 TCRBP04435 133 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 TRAPPC2P0DI81 140 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 TRAPPC2BP0DI82 140 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 PF4V1P10720 104 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
SNCA-202ENST00000345009 PPIFP30405 207 aaKnown RBP9.28□□□□□ -0.92
SNCA-202ENST00000345009 NDPQ00604 133 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 SRSF4Q08170 494 aaKnown RBP9.28□□□□□ -0.92
SNCA-202ENST00000345009 C4orf46Q504U0 113 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 TMEM230Q96A57 120 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 CITED2Q99967 270 aaPredicted RBP9.28□□□□□ -0.92
SNCA-202ENST00000345009 PDCD10Q9BUL8 212 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 QTRT1Q9BXR0 403 aaKnown RBP9.28□□□□□ -0.92
SNCA-202ENST00000345009 OR51B2Q9Y5P1 312 aa9.28□□□□□ -0.92
SNCA-202ENST00000345009 A0A0B4J2A0 478 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 A0A0G2JLM5 398 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 DUXBA0A1W2PPF3 345 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 SFT2D2O95562 160 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 IGKV1-39P01597 117 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 IGLV1-40P01703 118 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 IGKV1D-39P04432 117 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 OR9G9P0C7N8 305 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 PSMB8P28062 276 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 RAB9AP51151 201 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 KRTAP10-3P60369 221 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 CFHR3Q02985 330 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 TMEM187Q14656 261 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 MRGPRG-AS1Q2M3A8 158 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 SELENOHQ8IZQ5 122 aaKnown RBP9.27□□□□□ -0.93
SNCA-202ENST00000345009 RNF152Q8N8N0 203 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms