RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HPRT1P00492 218 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 ZNF735P0CB33 412 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 NQO2P16083 231 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 PSMB6P28072 239 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 RFX2P48378 723 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 TAS2R20P59543 309 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 ERVK-16P61578 105 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 GUCA2BQ16661 112 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 OR5H2Q8NGV7 314 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 OR4A5Q8NH83 315 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 BORCS5Q969J3 196 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 KCTD12Q96CX2 325 aaKnown RBP9.42□□□□□ -0.9
SGCA-202ENST00000344627 YIPF6Q96EC8 236 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 ZNF2Q9BSG1 426 aaPredicted RBP9.42□□□□□ -0.9
SGCA-202ENST00000344627 COMMD5Q9GZQ3 224 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 BET1LQ9NYM9 111 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 HIST1H1BP16401 226 aaKnown RBP9.41□□□□□ -0.9
SGCA-202ENST00000344627 PRSS3P35030 304 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 ARL3P36405 182 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 TAS2R31P59538 309 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 TAS2R46P59540 309 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 HAGHQ16775 308 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
SGCA-202ENST00000344627 CD300LFQ8TDQ1 290 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 FANCD2OSQ96PS1 177 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 LYSTQ99698 3801 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 ZC4H2Q9NQZ6 224 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 SLC2A8Q9NY64 477 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 COMMD3Q9UBI1 195 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 SELENOKQ9Y6D0 94 aa9.41□□□□□ -0.9
SGCA-202ENST00000344627 TRAV3A0A0B4J244 114 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 A0A1B0GW64 132 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 C2orf70A6NJV1 201 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 UPK2O00526 184 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 RBFOX2O43251 390 aaKnown RBP eCLIP9.4□□□□□ -0.9
SGCA-202ENST00000344627 TPPPO94811 219 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 S1PR2O95136 353 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 CRYGCP07315 174 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 FOLR2P14207 255 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 CTRB1P17538 263 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 GNRHRP30968 328 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 MECP2P51608 486 aaKnown RBP9.4□□□□□ -0.9
SGCA-202ENST00000344627 CD81P60033 236 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 FAM106AQ4KMX7 169 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 CTRB2Q6GPI1 263 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 CMTM1Q8IZ96 169 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 OR6F1Q8NGZ6 308 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 THAP7Q9BT49 309 aaPredicted RBP9.4□□□□□ -0.9
SGCA-202ENST00000344627 HINT2Q9BX68 163 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
SGCA-202ENST00000344627 RYR2Q92736 4967 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 CYB5BO43169 146 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 PGLYRP1O75594 196 aaPredicted RBP9.39□□□□□ -0.91
SGCA-202ENST00000344627 RLN1P04808 185 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 CLEC3BP05452 202 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 EDN2P20800 178 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 HLA-DMAP28067 261 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 RPL5P46777 297 aaKnown RBP9.39□□□□□ -0.91
SGCA-202ENST00000344627 OR2B8PP59922 312 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 TSPAN5P62079 268 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 DHRS11Q6UWP2 260 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 ADAMTSL5Q6ZMM2 481 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 SNX29P2Q8IUI4 249 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 CXorf58Q96LI9 332 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 NEURL2Q9BR09 285 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 QTRT1Q9BXR0 403 aaKnown RBP9.39□□□□□ -0.91
SGCA-202ENST00000344627 PLEKHA2Q9HB19 425 aa9.39□□□□□ -0.91
SGCA-202ENST00000344627 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
SGCA-202ENST00000344627 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 SNAPC5O75971 98 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 KRASP01116 189 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 EIF4EP06730 217 aaKnown RBP9.38□□□□□ -0.91
SGCA-202ENST00000344627 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 F2RP25116 425 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 S100GP29377 79 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 HRH1P35367 487 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 LPAR6P43657 344 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 VBP1P61758 197 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 NCS1P62166 190 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 PHLDA2Q53GA4 152 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 ZFAND6Q6FIF0 208 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 SLC25A24Q6NUK1 477 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
SGCA-202ENST00000344627 GPHB5Q86YW7 130 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 OR10W1Q8NGF6 305 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 SLC25A46Q96AG3 418 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 THYN1Q9P016 225 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 CEPT1Q9Y6K0 416 aa9.38□□□□□ -0.91
SGCA-202ENST00000344627 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms