RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 HSD17B13Q7Z5P4 300 aaPredicted RBP10.93□□□□□ -0.66
CDC42-202ENST00000344548 MOB3BQ86TA1 216 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 DYNAPQ8N1N2 210 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 OR11H6Q8NGC7 330 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 CIB3Q96Q77 187 aaPredicted RBP10.93□□□□□ -0.66
CDC42-202ENST00000344548 TSNAXQ99598 290 aaKnown RBP10.93□□□□□ -0.66
CDC42-202ENST00000344548 TMEM231Q9H6L2 316 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 HILPDAQ9Y5L2 63 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 NBPF19A0A087WUL8 3843 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 IGHV4-61A0A0C4DH41 118 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 A0A1B0GV50 99 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 PRSS46E5RG02 174 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 M0R1W7 72 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 IFNA10P01566 189 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 HOXA1P49639 335 aaPredicted RBP10.93□□□□□ -0.66
CDC42-202ENST00000344548 KRTAP10-9P60411 292 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
CDC42-202ENST00000344548 PCGF1Q9BSM1 259 aa10.93□□□□□ -0.66
CDC42-202ENST00000344548 WDR61Q9GZS3 305 aaKnown RBP10.93□□□□□ -0.66
CDC42-202ENST00000344548 hCG_1809904A0A1W2PP81 198 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 A0A1W2PPE2 198 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 A0A1W2PR64 198 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 A0A1W2PRV1 198 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 DFFBO76075 338 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 HBG1P69891 147 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 HBG2P69892 147 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 EIF4E3Q8N5X7 224 aaKnown RBP10.92□□□□□ -0.66
CDC42-202ENST00000344548 OR10P1Q8NGE3 313 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 LRRC20Q8TCA0 184 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 PERPQ96FX8 193 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 SIRPDQ9H106 197 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 ZNF430Q9H8G1 570 aaPredicted RBP10.92□□□□□ -0.66
CDC42-202ENST00000344548 FAM96BQ9Y3D0 163 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 IGHV4-30-2A0A087WSY4 118 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 ODF3BA8MYP8 253 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 IL3RAP26951 378 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 ATP5J2P56134 94 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 ZNF616Q08AN1 781 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 LYPD6BQ8NI32 183 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 FAM213BQ8TBF2 198 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 RPEQ96AT9 228 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 FAM210AQ96ND0 272 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
CDC42-202ENST00000344548 IGHV2-70DA0A0C4DH43 119 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 IFNA5P01569 189 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 PRH1P02810 166 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 HOXB4P17483 251 aaPredicted RBP10.91□□□□□ -0.66
CDC42-202ENST00000344548 MC5RP33032 325 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 PDLIM4P50479 330 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 TPTE2P1Q5T6R2 138 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 SLC25A24Q6NUK1 477 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 TMEM167AQ8TBQ9 72 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 HIPK2Q9H2X6 1198 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 PRNDQ9UKY0 176 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 TIMM23O14925 209 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 GOSR1O95249 250 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 CA2P00918 260 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 HTR1DP28221 377 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 CAMLGP49069 296 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 RPL8P62917 257 aaKnown RBP10.91□□□□□ -0.66
CDC42-202ENST00000344548 CCL20P78556 96 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 ETV3LQ6ZN32 361 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 BPIFCQ8NFQ6 507 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 C10orf105Q8TEF2 133 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 FAM168AQ92567 244 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 TAF15Q92804 592 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDC42-202ENST00000344548 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 TBX15Q96SF7 602 aa10.91□□□□□ -0.66
CDC42-202ENST00000344548 C9JQL5 133 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 MDKP21741 143 aaPredicted RBP10.9□□□□□ -0.66
CDC42-202ENST00000344548 MLANAQ16655 118 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 SSX7Q7RTT5 188 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 NDUFA4L2Q9NRX3 87 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 DPM3Q9P2X0 92 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 ZNF257Q9Y2Q1 563 aa10.9□□□□□ -0.66
CDC42-202ENST00000344548 VWC2LB2RUY7 222 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 SCO1O75880 301 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 IGKV1D-33P01593 117 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 IGKV1-33P01594 117 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 CRYGBP07316 175 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 DEFA4P12838 97 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 RAB13P51153 203 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 F2RL1P55085 397 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 SSX2Q16385 188 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 SLC24A4Q8NFF2 622 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 CFHR4Q92496 578 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 GNPNAT1Q96EK6 184 aaPredicted RBP10.89□□□□□ -0.67
CDC42-202ENST00000344548 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 SCRT1Q9BWW7 348 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 UNKLQ9H9P5 680 aaKnown RBP10.89□□□□□ -0.67
CDC42-202ENST00000344548 RPRMQ9NS64 109 aa10.89□□□□□ -0.67
CDC42-202ENST00000344548 UQCC1Q9NVA1 299 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms