RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 FSCN3Q9NQT6 498 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 MYO5AQ9Y4I1 1855 aaKnown RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF815PA8K554 130 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 PVRP15151 417 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 C10orf105Q8TEF2 133 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 OTOFQ9HC10 1997 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 COL10A1Q03692 680 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 GFI1BQ5VTD9 330 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CLEC4DQ8WXI8 215 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 LINC01619G3V211 115 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 MSCO60682 206 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 ADCYAP1P18509 176 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 WDR82Q6UXN9 313 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 RPRMLQ8N4K4 120 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 KLK6Q92876 244 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CACNA1AO00555 2505 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 B4GALT1P15291 398 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CTSOP43234 321 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 Q6P435 159 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TAAR3PQ9P1P4 343 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 E9PLN8 166 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 SOCS3O14543 225 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 METTL26Q96S19 204 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 USP54Q70EL1 1684 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 IGLV3-22A0A075B6J6 115 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 NAPSAO96009 420 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 KIR3DS1Q14943 382 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 YOD1Q5VVQ6 348 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM211Q6ICI0 200 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 C2orf82Q6UX34 121 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CXCL16Q9H2A7 254 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 A0A1B0GUT8 65 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 C11orf98E9PRG8 122 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 K7EMI3 77 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 RNF39Q9H2S5 420 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 EPDR1Q9UM22 224 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 SLC25A15Q9Y619 301 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 A0A1W2PPM0 123 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CIARTQ8N365 385 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 DOCK6Q96HP0 2047 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 LCN12Q6JVE5 192 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 Q6ZVH6 145 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 EEF1AKMT3Q96AZ1 226 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 KIR2DS5A0A0G2JLQ3 304 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 A0A0G2JNG1 304 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 KIR2DS5Q14953 304 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 GTSCR1Q86UQ5 136 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CCDC140Q96MF4 163 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 APOOQ9BUR5 198 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 UBL5Q9BZL1 73 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CHD4Q14839 1912 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 F2Z2F3 143 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 UQCRQO14949 82 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM179BQ7Z7N9 219 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CLDND2Q8NHS1 167 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 IRF7Q92985 503 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 RNF126Q9BV68 326 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 NPCDR1Q9BY65 106 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 POLR3KQ9Y2Y1 108 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM30CPA0ZSE6 113 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CA6P23280 308 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TFPI2P48307 235 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 IL15RAQ13261 267 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 SNED1Q8TER0 1413 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 FUT5Q11128 374 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 NUDT8Q8WV74 236 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TOGARAM1Q9Y4F4 1720 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TRAV27A0A087WT01 109 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 PDCD6O75340 191 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF524Q96C55 264 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 PRO0628Q9UI54 55 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 TRAV14DV4A0A0A6YYC5 116 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 ADAMTSL5Q6ZMM2 481 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 C1orf210Q8IVY1 113 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 GATAD1Q8WUU5 269 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 DEC1Q9P2X7 70 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 MRPS17Q9Y2R5 130 aaKnown RBP3.21□□□□□ -1.89
SYNE2-202ENST00000344113 MYO9AB2RTY4 2548 aa3.21□□□□□ -1.89
SYNE2-202ENST00000344113 A4D1N5 150 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TGIF1Q15583 401 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 LY6G6FQ5SQ64 297 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ASCL2Q99929 193 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 GDF9O60383 454 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 CACNG7P62955 275 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 C5orf24Q7Z6I8 188 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 OR13A1Q8NGR1 328 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 C15orf62A8K5M9 175 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 PRTN3P24158 256 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 OTOSQ8NHW6 89 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TM4SF19Q96DZ7 209 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 STARD5Q9NSY2 213 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 YLPM1P49750 1951 aaKnown RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 PGPA6NDG6 321 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 C9JAW5 83 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 EFEMP2O95967 443 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 HBDP02042 147 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ODF1Q14990 250 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 FAM214BQ7L5A3 538 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 HIGD1AQ9Y241 93 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 MCM3APO60318 1980 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms