RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 IL6RP08887 468 aaPredicted RBP6.04□□□□□ -1.44
VCAN-202ENST00000342785 PCSK4Q6UW60 755 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 OR9G1Q8NH87 305 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 TMEM191AQ9H0A3 160 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 GRIFINA4D1Z8 144 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 TCAPO15273 167 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 PSPNO60542 156 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 HLA-DQA1P01909 254 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 OR5AL1P0C617 328 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 ACSF3Q4G176 576 aaPredicted RBP6.04□□□□□ -1.44
VCAN-202ENST00000342785 WDR82Q6UXN9 313 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 ZNF596Q8TC21 504 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 TMEM171Q8WVE6 324 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 C1RLQ9NZP8 487 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 ISLRO14498 428 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 RAMP3O60896 148 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 ATP5G3P48201 142 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 LCN2P80188 198 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 NHLH1Q02575 133 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 OR4C13Q8NGP0 309 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 DOLPP1Q86YN1 238 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 MRPL18Q9H0U6 180 aaKnown RBP6.03□□□□□ -1.44
VCAN-202ENST00000342785 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 COA4Q9NYJ1 87 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 ADCYAP1P18509 176 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 NUBP1P53384 320 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 ATP5IP56385 69 aaPredicted RBP6.03□□□□□ -1.44
VCAN-202ENST00000342785 ZNF146Q15072 292 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 ASCL4Q6XD76 172 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 C11orf42Q8N5U0 333 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 FAM122AQ96E09 287 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 SGK494Q96LW2 274 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 VSIRQ9H7M9 311 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 TMSB15BA0A087X1C1 80 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 WIPF3A6NGB9 483 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 LINC00587B1AMM8 73 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 IL18BPO95998 194 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 CBLN1P23435 193 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 OR4A47Q6IF82 309 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 C5orf17Q8NAS9 161 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 MBD3L1Q8WWY6 194 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 HIGD1AQ9Y241 93 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 KBTBD11-OT1A0A1B0GTJ5 212 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 CCL21O00585 134 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 NDUFA2O43678 99 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 FAM87AP0C7U9 286 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 RPL23P62829 140 aaKnown RBP6.03□□□□□ -1.44
VCAN-202ENST00000342785 TMEM183AQ8IXX5 376 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 RNF166Q96A37 237 aaPredicted RBP6.03□□□□□ -1.44
VCAN-202ENST00000342785 SFRP2Q96HF1 295 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 FER1L5A0AVI2 2057 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 IGKV1-5P01602 117 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 CD59P13987 128 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 TMEM30BQ3MIR4 351 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 NHLRC2Q8NBF2 726 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 SCNM1Q9BWG6 230 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 NAGKQ9UJ70 344 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 WDR83OSQ9Y284 106 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 PCNX2A6NKB5 2137 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 H3BTX0 84 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 LILRA1O75019 489 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 LGALS7P47929 136 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 FOXF2Q12947 444 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 RSPO1Q2MKA7 263 aaPredicted RBP6.03□□□□□ -1.44
VCAN-202ENST00000342785 TMEM186Q96B77 213 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 HS3ST6Q96QI5 342 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 SSBP3Q9BWW4 388 aaPredicted RBP6.03□□□□□ -1.44
VCAN-202ENST00000342785 BET1LQ9NYM9 111 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 HILPDAQ9Y5L2 63 aa6.03□□□□□ -1.44
VCAN-202ENST00000342785 IGFBP2P18065 325 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 RIGQ13278 110 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 MST1LQ2TV78 715 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 RPP25LQ8N5L8 163 aaKnown RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 OSR1Q8TAX0 266 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 C19orf24Q9BVV8 132 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HSPB7Q9UBY9 170 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 GOLGB1Q14789 3259 aaKnown RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 ANKHD1Q8IWZ3 2542 aaKnown RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 MUC6Q6W4X9 2439 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 ANAPC1Q9H1A4 1944 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 PTPRQQ9UMZ3 2332 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 CGAP01215 116 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 LYL1P12980 280 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 ZNF25P17030 456 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 CD40P25942 277 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 RNF151Q2KHN1 245 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 SPRR3Q9UBC9 169 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 C9JQL5 133 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 CORTO00230 105 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BKO60814 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 SS18L1O75177 396 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BJP06899 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BOP23527 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 GATA2P23769 480 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BBP33778 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BDP58876 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BCP62807 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 SRSF7Q16629 238 aaKnown RBP eCLIP6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST2H2BEQ16778 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 CENPWQ5EE01 88 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms