RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ATAD5Q96QE3 1844 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 H0YL77 283 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 LHX2P50458 406 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 TMEM187Q14656 261 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 C1QTNF5Q9BXJ0 243 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 RGPD3A6NKT7 1758 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-202ENST00000342494 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBE3B-202ENST00000342494 CD59P13987 128 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 ICAM4Q14773 271 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 PAPPA-AS1Q5QFB9 102 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 EMP1P54849 157 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 CD200R1LQ6Q8B3 271 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 TP53RKQ96S44 253 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 EIF3GO75821 320 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBE3B-202ENST00000342494 THBDP07204 575 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
UBE3B-202ENST00000342494 FAM90A1Q86YD7 464 aa12.68□□□□□ -0.38
UBE3B-202ENST00000342494 ZNF256Q9Y2P7 627 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-202ENST00000342494 CXCL2P19875 107 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 IGLV3-12A0A075B6K2 115 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 IGKV1D-43A0A0B4J1Z2 117 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 IQCF6A8MYZ5 107 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 ABLIM2Q6H8Q1 611 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 MRPL20Q9BYC9 149 aaKnown RBP12.67□□□□□ -0.38
UBE3B-202ENST00000342494 IFI27L2Q9H2X8 130 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 H7C1H1 209 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 RRHO14718 337 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
UBE3B-202ENST00000342494 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 COL25A1Q9BXS0 654 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-202ENST00000342494 TNFRSF18Q9Y5U5 241 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 LY75O60449 1722 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-202ENST00000342494 SEMA5BQ9P283 1151 aa12.67□□□□□ -0.38
UBE3B-202ENST00000342494 LOC102723996A0A087X1L8 192 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 REPIN1Q9BWE0 567 aaKnown RBP12.66□□□□□ -0.38
UBE3B-202ENST00000342494 CBY1Q9Y3M2 126 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 M0QZK8 103 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 ZNF250P15622 560 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 C1QL2Q7Z5L3 287 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 ZNF837Q96EG3 531 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-202ENST00000342494 AQP10Q96PS8 301 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 LINC01587Q99440 93 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 CCDC88CQ9P219 2028 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 TRBV20OR9-2A0A075B6H5 130 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 F12P00748 615 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-202ENST00000342494 KLK2P20151 261 aa12.66□□□□□ -0.38
UBE3B-202ENST00000342494 A0A087X0M5 115 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 A0A1B0GX30 115 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 NPIPB9F8W1W9 429 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 ASIPP42127 132 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 CNOT1A5YKK6 2376 aaKnown RBP12.65□□□□□ -0.38
UBE3B-202ENST00000342494 NPIPB7O75200 414 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 TBR1Q16650 682 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 C8orf46Q8TAG6 207 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 M0R381 172 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 CCL3L1P16619 93 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 GCHFRP30047 84 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
UBE3B-202ENST00000342494 MYOD1P15172 320 aa12.65□□□□□ -0.39
UBE3B-202ENST00000342494 CA7P43166 264 aa12.65□□□□□ -0.39
UBE3B-202ENST00000342494 HSPB9Q9BQS6 159 aa12.65□□□□□ -0.39
UBE3B-202ENST00000342494 IL6RP08887 468 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 SCN10AQ9Y5Y9 1956 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 ZNF25P17030 456 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 ABCA7Q8IZY2 2146 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 TEX45Q8NA69 505 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 CACNA1IQ9P0X4 2223 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 TRAV24A0A0B4J272 114 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 MSGN1A6NI15 193 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 NBR2O15453 112 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 TRAF4Q9BUZ4 470 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 MRPS16Q9Y3D3 137 aaKnown RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 CKAP5Q14008 2032 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 LYNX1G3V0Z9 82 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 LYNX1P0DP58 116 aa12.64□□□□□ -0.39
UBE3B-202ENST00000342494 ZCCHC24Q8N2G6 241 aaKnown RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 MRPL18Q9H0U6 180 aaKnown RBP12.64□□□□□ -0.39
UBE3B-202ENST00000342494 LINC00862A6NCI5 91 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 C17orf98A8MV24 154 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 PRB3Q04118 309 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-202ENST00000342494 TMEM70Q9BUB7 260 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 DEPPQ9NTK1 212 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 DOCK3Q8IZD9 2030 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 LBHQ53QV2 105 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-202ENST00000342494 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms