RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 PLCE1Q9P212 2302 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 NAT8Q9UHE5 227 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 SMCO3A2RU48 225 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 TMEM250H0YL14 139 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 CLDN34H7C241 214 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 CYB5BO43169 146 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 MMP23AO75900 390 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 KBTBD11O94819 623 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 LOXP28300 417 aaPredicted RBP12.3□□□□□ -0.44
TPM3-208ENST00000341485 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
TPM3-208ENST00000341485 CYP2G1PQ6ZSU1 146 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 C1orf87Q8N0U7 546 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 ABHD12Q8N2K0 398 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 RPUSD4Q96CM3 377 aaKnown RBP12.3□□□□□ -0.44
TPM3-208ENST00000341485 TMEM204Q9BSN7 226 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 IDI2-AS1Q9NZ38 188 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
TPM3-208ENST00000341485 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 SEC14L6B5MCN3 397 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 PAGE4O60829 102 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 THBS3P49746 956 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 MRPS11P82912 194 aaKnown RBP12.29□□□□□ -0.44
TPM3-208ENST00000341485 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 OR4F5Q8NH21 305 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 OR4F4Q96R69 305 aa12.29□□□□□ -0.44
TPM3-208ENST00000341485 ACACBO00763 2458 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
TPM3-208ENST00000341485 PRB1P04280 392 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 SMIM6P0DI80 62 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 GNG10P50151 68 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 ADIRFQ15847 76 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 TEX36Q5VZQ5 186 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 OR4A47Q6IF82 309 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 CCL17Q92583 94 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 GGACTQ9BVM4 153 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 PARLQ9H300 379 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 LINC00574Q9H8X3 128 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 NBASA2RRP1 2371 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 TRAV38-1A0A0B4J264 116 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 CLN5O75503 358 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 YIF1AO95070 293 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 CORO2AQ92828 525 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 FAM210BQ96KR6 192 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 RHOVQ96L33 236 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 MGST2Q99735 147 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 CTDSP1Q9GZU7 261 aa12.28□□□□□ -0.44
TPM3-208ENST00000341485 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
TPM3-208ENST00000341485 MPDU1O75352 247 aa12.27□□□□□ -0.45
TPM3-208ENST00000341485 NDUFS6O75380 124 aaKnown RBP12.27□□□□□ -0.45
TPM3-208ENST00000341485 RPL23P62829 140 aaKnown RBP12.27□□□□□ -0.45
TPM3-208ENST00000341485 NANPQ8TBE9 248 aa12.27□□□□□ -0.45
TPM3-208ENST00000341485 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.45
TPM3-208ENST00000341485 TMEM14BQ9NUH8 114 aa12.27□□□□□ -0.45
TPM3-208ENST00000341485 TMEM106BQ9NUM4 274 aa12.27□□□□□ -0.45
TPM3-208ENST00000341485 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.45
TPM3-208ENST00000341485 NKX6-3A6NJ46 265 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 TRGC2P03986 189 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 HOXA5P20719 270 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 OPRK1P41145 380 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 C16orf82Q7Z2V1 217 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
TPM3-208ENST00000341485 C1orf159Q96HA4 380 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 GGTLC1Q9BX51 225 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 RPUSD1Q9UJJ7 312 aaKnown RBP12.26□□□□□ -0.45
TPM3-208ENST00000341485 PPIAL4EA0A075B759 164 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 PPIAL4DF5H284 164 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 TMEM178BH3BS89 294 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 OPN1MWP04001 364 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 S100A9P06702 114 aaKnown RBP12.26□□□□□ -0.45
TPM3-208ENST00000341485 PPIAL4FP0DN26 164 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 OPN1MW2P0DN77 364 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 OPN1MW3P0DN78 364 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 MYOD1P15172 320 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 NPPCP23582 126 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 NDUFA6P56556 154 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 BSXQ3C1V8 233 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 MIC13Q5XKP0 118 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 RAB1CQ92928 201 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
TPM3-208ENST00000341485 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 PATZ1Q9HBE1 687 aaKnown RBP12.26□□□□□ -0.45
TPM3-208ENST00000341485 DOK5Q9P104 306 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 ZNRD1Q9P1U0 126 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 PPIAL4AQ9Y536 164 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 CACNA1BQ00975 2339 aa12.26□□□□□ -0.45
TPM3-208ENST00000341485 SOX15O60248 233 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BKO60814 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BJP06899 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BOP23527 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BBP33778 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BDP58876 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HSPE1P61604 102 aaKnown RBP12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BCP62807 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 POU2AF1Q16633 256 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms