RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CRYGCP07315 174 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 NPY1RP25929 384 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 HTD2P86397 168 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 OR8B3Q8NGG8 313 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 OR8B2Q96RD0 313 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 GPHA2Q96T91 129 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 HES4Q9HCC6 221 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 GP6Q9HCN6 339 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 UBE2J1Q9Y385 318 aaPredicted RBP9.92□□□□□ -0.82
RTN3-203ENST00000341307 APC2O95996 2303 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 SMG1Q96Q15 3661 aaKnown RBP9.92□□□□□ -0.82
RTN3-203ENST00000341307 ACACBO00763 2458 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.92□□□□□ -0.82
RTN3-203ENST00000341307 CTXND1A0A1B0GTU2 59 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 TSPAN13O95857 204 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 PPOXP50336 477 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
RTN3-203ENST00000341307 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 COLCA1Q6ZS62 124 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 NINJ1Q92982 152 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 GNB1LQ9BYB4 327 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 HES7Q9BYE0 225 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 DOCK10Q96BY6 2186 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 ANKRD11Q6UB99 2663 aaPredicted RBP9.91□□□□□ -0.82
RTN3-203ENST00000341307 SLC22A20A6NK97 555 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 CYB561P49447 251 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 PSG7Q13046 419 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 KISS1Q15726 138 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 SLC25A47Q6Q0C1 308 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 TBC1D26Q86UD7 250 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 COMMD5Q9GZQ3 224 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 A0A087X0K7 114 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 TEX48A0A1B0GUV7 120 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 FAM181BA6NEQ2 426 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 C2orf70A6NJV1 201 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 VDAC1P21796 283 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 ATP5G3P48201 142 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 B3GALT5-AS1P59052 145 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 EIF3IQ13347 325 aaKnown RBP9.91□□□□□ -0.82
RTN3-203ENST00000341307 CEACAM21Q3KPI0 293 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 ZNF788Q6ZQV5 615 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 TAF15Q92804 592 aaKnown RBP eCLIP9.91□□□□□ -0.82
RTN3-203ENST00000341307 ZNF837Q96EG3 531 aaPredicted RBP9.91□□□□□ -0.82
RTN3-203ENST00000341307 OR4C12Q96R67 309 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 GEMIN7Q9H840 131 aaKnown RBP9.91□□□□□ -0.82
RTN3-203ENST00000341307 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 CRIM1Q9NZV1 1036 aa9.91□□□□□ -0.82
RTN3-203ENST00000341307 TRBV9A0A0B4J1U6 114 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 A0A0G2JRQ6 117 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 GAGE12HA6NDE8 117 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 K7EQM0 130 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 DEGS1O15121 323 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 SERPINE2P07093 398 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 SRIP30626 198 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 FOXE3Q13461 319 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 ATP1A1-AS1Q5TC04 95 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 PLCXD3Q63HM9 321 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 SLC25A34Q6PIV7 304 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 KIR3DL3Q8N743 410 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 ZNF439Q8NDP4 499 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 APOBEC3DQ96AK3 386 aaPredicted RBP9.9□□□□□ -0.82
RTN3-203ENST00000341307 NAT8BQ9UHF3 227 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 PPP1R3CQ9UQK1 317 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
RTN3-203ENST00000341307 ACACAQ13085 2346 aa9.9□□□□□ -0.82
RTN3-203ENST00000341307 NPIPA3F8WFD2 350 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 NTF4P34130 210 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 MEF2CQ06413 473 aaPredicted RBP9.9□□□□□ -0.83
RTN3-203ENST00000341307 ODF1Q14990 250 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 RNPS1Q15287 305 aaKnown RBP9.9□□□□□ -0.83
RTN3-203ENST00000341307 TMEM177Q53S58 311 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 C9orf135Q5VTT2 229 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 LINC00696Q6ZRV3 163 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 FER1L6-AS2Q96M78 137 aa9.9□□□□□ -0.83
RTN3-203ENST00000341307 C5orf63A6NC05 138 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 BMPR1BO00238 502 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 F2RL2O00254 374 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 BRI3O95415 125 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 RAB31Q13636 194 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 GABRA6Q16445 453 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 CD300EQ496F6 205 aaPredicted RBP9.89□□□□□ -0.83
RTN3-203ENST00000341307 TMEM136Q6ZRR5 245 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 SCCPDHQ8NBX0 429 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 OCC1Q8TAD7 63 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 MRAP2Q96G30 205 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 Q96M66 194 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 ULBP2Q9BZM5 246 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 ZNF835Q9Y2P0 537 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 UBE2L5PA0A1B0GUS4 154 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 C9orf118A6NHY6 69 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 CELA3AP09093 270 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 DEFA4P12838 97 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 GATA3P23771 443 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 FKBP2P26885 142 aaKnown RBP9.89□□□□□ -0.83
RTN3-203ENST00000341307 UBE2G1P62253 170 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 Q6ZPA2 131 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 GGNQ86UU5 652 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 OR8B12Q8NGG6 310 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 OR5A2Q8NGI9 324 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms