RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 H2BFWTQ7Z2G1 175 aa10.33□□□□□ -0.76
TUBD1-202ENST00000340993 SGPP2Q8IWX5 399 aa10.33□□□□□ -0.76
TUBD1-202ENST00000340993 KLHL30-AS1Q8NEE0 82 aa10.33□□□□□ -0.76
TUBD1-202ENST00000340993 TMEM167AQ8TBQ9 72 aa10.33□□□□□ -0.76
TUBD1-202ENST00000340993 CCDC32Q9BV29 185 aa10.33□□□□□ -0.76
TUBD1-202ENST00000340993 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 TRAV6A0A075B6T7 132 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 IGKV1-5P01602 117 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 AREGP15514 252 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 ANXA7P20073 488 aaKnown RBP10.32□□□□□ -0.76
TUBD1-202ENST00000340993 IFITM3Q01628 133 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 CFHR3Q02985 330 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 RBMS2Q15434 407 aaKnown RBP10.32□□□□□ -0.76
TUBD1-202ENST00000340993 TMEM268Q5VZI3 342 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 OR10W1Q8NGF6 305 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 SEC22AQ96IW7 307 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 SCGB3A2Q96PL1 93 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 ALX4Q9H161 411 aaPredicted RBP10.32□□□□□ -0.76
TUBD1-202ENST00000340993 BET1LQ9NYM9 111 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 TBC1D24Q9ULP9 559 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 FOXA2Q9Y261 457 aaPredicted RBP10.32□□□□□ -0.76
TUBD1-202ENST00000340993 NUBP2Q9Y5Y2 271 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 MGAM2Q2M2H8 2515 aa10.32□□□□□ -0.76
TUBD1-202ENST00000340993 A0A0G2JRQ6 117 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 IL6RP08887 468 aaPredicted RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 TPPP2P59282 170 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 SUPT4H1P63272 117 aaKnown RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 CD83Q01151 205 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 TMEM267Q0VDI3 215 aaPredicted RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 PPP1R1AQ13522 171 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 ZNF695Q8IW36 515 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 CENPSQ8N2Z9 138 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 GLYATL2Q8WU03 294 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 COMMD5Q9GZQ3 224 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 OR51B2Q9Y5P1 312 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 TSSC4Q9Y5U2 329 aaPredicted RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 NAP1L6A6NFF2 107 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 M0QZ24 198 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 CREBL2O60519 120 aaPredicted RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 UPK1BO75841 260 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 SNAPC5O75971 98 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 TRGV3P03979 118 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 C2orf68Q2NKX9 166 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 OR4A16Q8NH70 328 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
TUBD1-202ENST00000340993 TMEM222Q9H0R3 208 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 S4R3C0 116 aa10.31□□□□□ -0.76
TUBD1-202ENST00000340993 CGB1A6NKQ9 187 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 TEX22C9J3V5 150 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 NDUFB6O95139 128 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 IGHG4P01861 327 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 UCP1P25874 307 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 PSMB8P28062 276 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 MECP2P51608 486 aaKnown RBP10.3□□□□□ -0.76
TUBD1-202ENST00000340993 RPL23AP62750 156 aaKnown RBP10.3□□□□□ -0.76
TUBD1-202ENST00000340993 FOXE3Q13461 319 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 TMEM187Q14656 261 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 SELENOHQ8IZQ5 122 aaKnown RBP10.3□□□□□ -0.76
TUBD1-202ENST00000340993 MINDY2Q8NBR6 621 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 SLC25A21Q9BQT8 299 aaPredicted RBP10.3□□□□□ -0.76
TUBD1-202ENST00000340993 AIFM2Q9BRQ8 373 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 GNB4Q9HAV0 340 aa10.3□□□□□ -0.76
TUBD1-202ENST00000340993 TEX50A0A1B0GTY4 177 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 RAB9AP51151 201 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 UBE2MP61081 183 aaKnown RBP10.29□□□□□ -0.76
TUBD1-202ENST00000340993 POU2AF1Q16633 256 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 ANKRD55Q3KP44 614 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 AKIRIN2Q53H80 203 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 C19orf54Q5BKX5 351 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 OR52B4Q8NGK2 314 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 OR4A5Q8NH83 315 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 RRNAD1Q96FB5 475 aaKnown RBP10.29□□□□□ -0.76
TUBD1-202ENST00000340993 SPIN2AQ99865 258 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 SPIN2BQ9BPZ2 258 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 C20orf85Q9H1P6 137 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 NUDT15Q9NV35 164 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 FAM240BA0A1B0GVZ2 78 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 IGLV1-40P01703 118 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 IGHV3-23P01764 117 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 HLA-AP01891 365 aaKnown RBP10.29□□□□□ -0.76
TUBD1-202ENST00000340993 ELANEP08246 267 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 C4orf46Q504U0 113 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 LINC00299Q6ZSB3 139 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 LYZL2Q7Z4W2 148 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 FAM219AQ8IW50 185 aa10.29□□□□□ -0.76
TUBD1-202ENST00000340993 RBPMSQ93062 196 aaKnown RBP10.29□□□□□ -0.76
TUBD1-202ENST00000340993 C7orf50Q9BRJ6 194 aaKnown RBP10.29□□□□□ -0.76
TUBD1-202ENST00000340993 IGHV3-21A0A0B4J1V1 117 aa10.28□□□□□ -0.76
TUBD1-202ENST00000340993 C15orf61A6NNL5 157 aa10.28□□□□□ -0.76
TUBD1-202ENST00000340993 OR2J3O76001 311 aa10.28□□□□□ -0.76
TUBD1-202ENST00000340993 PF4P02776 101 aa10.28□□□□□ -0.76
TUBD1-202ENST00000340993 ANXA3P12429 323 aa10.28□□□□□ -0.76
TUBD1-202ENST00000340993 DEFA4P12838 97 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms