RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 CCDC140Q96MF4 163 aa10.63□□□□□ -0.71
COMMD4-202ENST00000338995 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
COMMD4-202ENST00000338995 COMMD5Q9GZQ3 224 aa10.63□□□□□ -0.71
COMMD4-202ENST00000338995 BET1LQ9NYM9 111 aa10.63□□□□□ -0.71
COMMD4-202ENST00000338995 ANXA10Q9UJ72 324 aa10.63□□□□□ -0.71
COMMD4-202ENST00000338995 S4R3C0 116 aa10.63□□□□□ -0.71
COMMD4-202ENST00000338995 E7EUB6 86 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 C8orf88P0DMB2 117 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 EDN2P20800 178 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 ARPC4P59998 168 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 TNFRSF9Q07011 255 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 MSMO1Q15800 293 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 TBCEQ15813 527 aaPredicted RBP10.62□□□□□ -0.71
COMMD4-202ENST00000338995 CEMP1Q6PRD7 247 aaPredicted RBP10.62□□□□□ -0.71
COMMD4-202ENST00000338995 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
COMMD4-202ENST00000338995 Q9H521 79 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 C5orf66Q9H5L9 145 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 ELF5Q9UKW6 265 aaPredicted RBP10.62□□□□□ -0.71
COMMD4-202ENST00000338995 RAB26Q9ULW5 256 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 SELENOKQ9Y6D0 94 aa10.62□□□□□ -0.71
COMMD4-202ENST00000338995 IGLV11-55A0A075B6I3 123 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 NOTOA8MTQ0 251 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 IGLV2-14P01704 120 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
COMMD4-202ENST00000338995 PTBP1P26599 531 aaKnown RBP eCLIP10.61□□□□□ -0.71
COMMD4-202ENST00000338995 CATR1Q13166 79 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 C22orf42Q6IC83 251 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 LYG2Q86SG7 212 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 TPRA1Q86W33 373 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 SPAG16Q8N0X2 631 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 CD300LFQ8TDQ1 290 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 C6orf62Q9GZU0 229 aaPredicted RBP10.61□□□□□ -0.71
COMMD4-202ENST00000338995 NDUFB11Q9NX14 153 aa10.61□□□□□ -0.71
COMMD4-202ENST00000338995 KIR2DL5BA0A0G2JN68 375 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 KIR2DL5BA0A0G2JPC4 375 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 TMEM235A6NFC5 223 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 RBFOX2O43251 390 aaKnown RBP eCLIP10.6□□□□□ -0.71
COMMD4-202ENST00000338995 HPRT1P00492 218 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 REG1AP05451 166 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 NQO2P16083 231 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 GPR183P32249 361 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 CMC4P56277 68 aaPredicted RBP10.6□□□□□ -0.71
COMMD4-202ENST00000338995 TAS2R31P59538 309 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 THOC7Q6I9Y2 204 aaKnown RBP10.6□□□□□ -0.71
COMMD4-202ENST00000338995 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 HSD17B13Q7Z5P4 300 aaPredicted RBP10.6□□□□□ -0.71
COMMD4-202ENST00000338995 KIR2DL5AQ8N109 375 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 KIR2DL5BQ8NHK3 375 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 ZNF502Q8TBZ5 544 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 VN1R17PQ8TDU5 208 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 NUDCD2Q8WVJ2 157 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 SECTM1Q8WVN6 248 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 BORCS5Q969J3 196 aa10.6□□□□□ -0.71
COMMD4-202ENST00000338995 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 TSPAN4O14817 238 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 FCGR2CP31995 323 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 OR2B8PP59922 312 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
COMMD4-202ENST00000338995 TIMM50Q3ZCQ8 353 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 SLC25A24Q6NUK1 477 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 UNQ9165/PRO28630Q6UXU0 137 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 DMBX1Q8NFW5 382 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 CNBD2Q96M20 576 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 CCL28Q9NRJ3 127 aa10.59□□□□□ -0.71
COMMD4-202ENST00000338995 PLECQ15149 4684 aaKnown RBP10.58□□□□□ -0.72
COMMD4-202ENST00000338995 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 A0A1B0GW64 132 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 MFSD2BA6NFX1 497 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 OR4C46A6NHA9 309 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 UPK2O00526 184 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 TGOLN2O43493 480 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 TNFSF12O43508 249 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 FGF2P09038 288 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 BRWD1-AS2P59051 145 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 SPSB3Q6PJ21 355 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 BEST4Q8NFU0 473 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 OR13F1Q8NGS4 319 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 RNF183Q96D59 192 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 GALNT14Q96FL9 552 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 ATP6V0BQ99437 205 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 QTRT1Q9BXR0 403 aaKnown RBP10.58□□□□□ -0.72
COMMD4-202ENST00000338995 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-202ENST00000338995 SLC5A7Q9GZV3 580 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
COMMD4-202ENST00000338995 DAPK2Q9UIK4 370 aa10.58□□□□□ -0.72
COMMD4-202ENST00000338995 SULT1C2O00338 296 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 MRPS14O60783 128 aaKnown RBP10.57□□□□□ -0.72
COMMD4-202ENST00000338995 TRAPPC2P0DI81 140 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 TRAPPC2BP0DI82 140 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 FGF9P31371 208 aaPredicted RBP10.57□□□□□ -0.72
COMMD4-202ENST00000338995 ERVK-16P61578 105 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 DEFB135Q30KP9 77 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 BSCL2Q96G97 398 aaPredicted RBP10.57□□□□□ -0.72
COMMD4-202ENST00000338995 PLEKHA2Q9HB19 425 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 UBQLN2Q9UHD9 624 aa10.57□□□□□ -0.72
COMMD4-202ENST00000338995 SSR3Q9UNL2 185 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms