RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 UBTD1Q9HAC8 227 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 SNRNP200O75643 2136 aaKnown RBP13.26□□□□□ -0.29
HDAC5-202ENST00000336057 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 CDC42EP3Q9UKI2 254 aa13.26□□□□□ -0.29
HDAC5-202ENST00000336057 HOXA5P20719 270 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 PMCHL1Q16048 86 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 ZNF497Q6ZNH5 498 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.25□□□□□ -0.29
HDAC5-202ENST00000336057 IGKV1-27A0A075B6S5 117 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 SPATA45Q537H7 98 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 GSN-AS1Q9NRJ2 163 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 CBLN1P23435 193 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 TMEM177Q53S58 311 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 OR4A47Q6IF82 309 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 NTN3O00634 580 aaPredicted RBP13.25□□□□□ -0.29
HDAC5-202ENST00000336057 REG1AP05451 166 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 GGNQ86UU5 652 aa13.25□□□□□ -0.29
HDAC5-202ENST00000336057 TMEM189A5PLL7 270 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 ZNF324BQ6AW86 544 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-202ENST00000336057 C9orf172C9J069 976 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 IGHV3-48P01763 117 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 CCL20P78556 96 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
HDAC5-202ENST00000336057 OSR1Q8TAX0 266 aaPredicted RBP13.24□□□□□ -0.29
HDAC5-202ENST00000336057 SPTBN2O15020 2390 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 IGKV3D-15A0A087WSY6 115 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 C5orf63A6NC05 138 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 PRR7Q8TB68 274 aa13.24□□□□□ -0.29
HDAC5-202ENST00000336057 KBTBD11-OT1A0A1B0GTJ5 212 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 ATP5G3P48201 142 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 Q1RN00 199 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 FAM201AQ5SY85 155 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 PGLYRP4Q96LB8 373 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 SEMA5BQ9P283 1151 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 FAM90A1Q86YD7 464 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 PPIAL4CA0A0B4J2A2 164 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 J3KRW8 73 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 CGAP01215 116 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 PPIAL4GP0DN37 164 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 IGFBP2P18065 325 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 CA7P43166 264 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 IFI27L2Q9H2X8 130 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 UQCR10Q9UDW1 63 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 CLDN16Q9Y5I7 305 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 MPDZO75970 2070 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 RELBQ01201 579 aa13.23□□□□□ -0.29
HDAC5-202ENST00000336057 SRSF7Q16629 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
HDAC5-202ENST00000336057 LOC389332A0A1B0GUA5 103 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 TM4SF5O14894 197 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 LEPROTL1O95214 131 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 RPL23P62829 140 aaKnown RBP13.22□□□□□ -0.29
HDAC5-202ENST00000336057 RTN4RL2Q86UN3 420 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 SGK494Q96LW2 274 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 A6NDN8 102 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 CFPP27918 469 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 SLC25A33Q9BSK2 321 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 SSBP3Q9BWW4 388 aaPredicted RBP13.22□□□□□ -0.29
HDAC5-202ENST00000336057 COL4A6Q14031 1691 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 SCGB1C2P0DMR2 95 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 MAS1LP35410 378 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 FAM216BQ8N7L0 139 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 FCGR2BP31994 310 aaPredicted RBP13.22□□□□□ -0.29
HDAC5-202ENST00000336057 FAM27E3Q08E93 113 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 PET117Q6UWS5 81 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 REC114Q7Z4M0 266 aa13.22□□□□□ -0.29
HDAC5-202ENST00000336057 ZNF318Q5VUA4 2279 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 SCO2A0A1W2PP80 73 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 CLEC7AQ9BXN2 247 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 CBLN4Q9NTU7 201 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 IL36BQ9NZH7 164 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 PHF3Q92576 2039 aaKnown RBP13.21□□□□□ -0.29
HDAC5-202ENST00000336057 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 RAMP3O60896 148 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 FOXG1P55316 489 aaPredicted RBP13.21□□□□□ -0.29
HDAC5-202ENST00000336057 TWIST1Q15672 202 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 C9orf106Q8NAJ2 232 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 MRPL37Q9BZE1 423 aaKnown RBP13.21□□□□□ -0.29
HDAC5-202ENST00000336057 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 IGHV1-69-2A0A0G2JMI3 117 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 H3BTX0 84 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 UCNP55089 124 aa13.21□□□□□ -0.29
HDAC5-202ENST00000336057 ACSF3Q4G176 576 aaPredicted RBP13.21□□□□□ -0.29
HDAC5-202ENST00000336057 SLC17A3O00476 420 aa13.21□□□□□ -0.3
HDAC5-202ENST00000336057 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.3
HDAC5-202ENST00000336057 KIR2DL2P43627 348 aaPredicted RBP13.21□□□□□ -0.3
HDAC5-202ENST00000336057 LPAR2Q9HBW0 351 aa13.21□□□□□ -0.3
HDAC5-202ENST00000336057 ELOVL5Q9NYP7 299 aa13.21□□□□□ -0.3
HDAC5-202ENST00000336057 RNF115Q9Y4L5 304 aa13.21□□□□□ -0.3
HDAC5-202ENST00000336057 CD55P08174 381 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 CD40P25942 277 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 GPX4P36969 197 aaPredicted RBP13.2□□□□□ -0.3
HDAC5-202ENST00000336057 MFAP4P55083 255 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 WDR82Q6UXN9 313 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 RALYQ9UKM9 306 aaKnown RBP13.2□□□□□ -0.3
HDAC5-202ENST00000336057 COLCA2A8K830 154 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms