RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 TNFRSF6BO95407 300 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 CD3EP07766 207 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 ERVK11-1P61568 191 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF415Q09FC8 603 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TBR1Q16650 682 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 CHCHD1Q96BP2 118 aaKnown RBP5.33□□□□□ -1.56
CSMD1-201ENST00000335551 GPR146Q96CH1 333 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 NPDC1Q9NQX5 325 aaPredicted RBP5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TRGV8A0A0C4DH27 118 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 APELAP0DMC3 54 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 GLULP15104 373 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 RPL31P62899 125 aaKnown RBP5.33□□□□□ -1.56
CSMD1-201ENST00000335551 ANAPC1Q9H1A4 1944 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TNFSF15O95150 251 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF793Q6ZN11 406 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 CLDND2Q8NHS1 167 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 C18orf15Q96N68 181 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TGFAP01135 160 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 C5orf66Q9H5L9 145 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 MRPS18AQ9NVS2 196 aaKnown RBP5.33□□□□□ -1.56
CSMD1-201ENST00000335551 RLFQ13129 1914 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 A0A1W2PQD3 144 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 SPINK8P0C7L1 97 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 OR10J3Q5JRS4 329 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 RNF7Q9UBF6 113 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TNFRSF18Q9Y5U5 241 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM8BA6NDV4 472 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 M0R2P5 195 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 FAM106CPP0CH98 169 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 DEFB103AP81534 67 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 SDF2L1Q9HCN8 221 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 CDIPTO14735 213 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 GOLT1AQ6ZVE7 132 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 ATG4DQ86TL0 474 aaPredicted RBP5.33□□□□□ -1.56
CSMD1-201ENST00000335551 GCSAMQ8N6F7 178 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 OR52M1Q8NGK5 317 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 SMPXQ9UHP9 88 aa5.33□□□□□ -1.56
CSMD1-201ENST00000335551 PAX1P15863 534 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 CRYBB3P26998 211 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 SSTR5P35346 364 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 RPL27AP46776 148 aaKnown RBP5.32□□□□□ -1.56
CSMD1-201ENST00000335551 P2RY4P51582 365 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 LOXL3P58215 753 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF658BQ4V348 819 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-201ENST00000335551 OR4D11Q8NGI4 311 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 GTSF1LQ9H1H1 148 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 EXPH5Q8NEV8 1989 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIGD1CA8MV81 97 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 SERF1AO75920 110 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 SSPNQ14714 243 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 LINC01549A6NIU2 74 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 NPIPB4C9JG80 1138 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 PPBPP02775 128 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 COL10A1Q03692 680 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF146Q15072 292 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 PMVKQ15126 192 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 C1QL4Q86Z23 238 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 A0A0G2JMM0 328 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 A0A1W2PPB8 328 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 PGPA6NDG6 321 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 KIR3DP1A8MWS1 328 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 H2BFSP57053 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 IGHV1-69-2A0A0G2JMI3 117 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 ST6GALNAC2Q9UJ37 374 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 H0Y8X5 98 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BKO60814 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 IGLV3-25P01717 112 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BJP06899 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BOP23527 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BBP33778 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BDP58876 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BCP62807 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 SIGLEC14Q08ET2 396 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST2H2BEQ16778 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM155Q4W5P6 130 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BHQ93079 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BNQ99877 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BMQ99879 126 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 IGKV3-7A0A075B6H7 116 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 IGLV3-16A0A075B6K0 115 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 IFITM2Q01629 132 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 VSTM2LQ96N03 204 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 SNAI2O43623 268 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 TNFSF13O75888 250 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 NOVP48745 357 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 EFNB2P52799 333 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 MAFAQ8NHW3 353 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-201ENST00000335551 PRR7Q8TB68 274 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 NXT2Q9NPJ8 142 aaKnown RBP5.32□□□□□ -1.56
CSMD1-201ENST00000335551 GPR132Q9UNW8 380 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 GPR179Q6PRD1 2367 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 METTL12A8MUP2 240 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 UBE2V1Q13404 147 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 LAMTOR1Q6IAA8 161 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 PLPPR1Q8TBJ4 325 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms