RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SHC1P29353 583 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 PRSS12P56730 875 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 DGCR2P98153 550 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 SIRPDQ9H106 197 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 CA10Q9NS85 328 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 FOXA2Q9Y261 457 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 RGPD3A6NKT7 1758 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A1W2PPM0 123 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 CSN3P07498 182 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BOP23527 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HLA-DMBP28068 263 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BBP33778 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 PDLIM4P50479 330 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BDP58876 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BCP62807 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST2H2BEQ16778 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 SPANXN1Q5VSR9 72 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 FCRL6Q6DN72 434 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 MARCH3Q86UD3 253 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BHQ93079 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BNQ99877 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BMQ99879 126 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 GPR35Q9HC97 309 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 CACNA1EQ15878 2313 aa5.23□□□□□ -1.57
CDC42BPA-201ENST00000334218 hCG_38984A0A1B0GV85 526 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 ISL1P61371 349 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 MORN2Q502X0 79 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 HEPN1Q6WQI6 88 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 OSR2Q8N2R0 312 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 FUBP1Q96AE4 644 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 SRSF8Q9BRL6 282 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 SCNM1Q9BWG6 230 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 IL36BQ9NZH7 164 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 BRCA1P38398 1863 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 E9PLD3 99 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 IGHV4-39P01824 125 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 UNGP13051 313 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 STHQ8IWL8 128 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 TAF15Q92804 592 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 FGF14Q92915 247 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 SIRT5Q9NXA8 310 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A1W2PPC1 479 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 FAM90A26D6RGX4 464 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 CRLF1O75462 422 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 RPS4XP62701 263 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 WDR82Q6UXN9 313 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 TEN1Q86WV5 123 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 C8orf31Q8N9H6 132 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 PLEKHB2Q96CS7 222 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 RBM38Q9H0Z9 239 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A1B0GW64 132 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 KLF4O43474 513 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 LAMTOR5O43504 91 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 RNF126Q9BV68 326 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 MYOM1P52179 1685 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A0J9YW62 118 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 AJAP1Q9UKB5 411 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 DTX4Q9Y2E6 619 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 SMIM26A0A096LP01 95 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 CRYGCP07315 174 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 H2BFSP57053 126 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 THBDP07204 575 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 KLF17Q5JT82 389 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 PLXDC1Q8IUK5 500 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 FBXO17Q96EF6 278 aa5.22□□□□□ -1.57
CDC42BPA-201ENST00000334218 G3V4G9 280 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 DYNLT3P51808 116 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 FABP5Q01469 135 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 PDE6HQ13956 83 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 LINC00303Q3SY05 128 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 FGF11Q92914 225 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 ERVH48-1M5A8F1 160 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 TGIF1Q15583 401 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 TMEM196Q5HYL7 178 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 C5P01031 1676 aa5.21□□□□□ -1.57
CDC42BPA-201ENST00000334218 HBDP02042 147 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 F13BP05160 661 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 NDUFV3P56181 108 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 STPG3Q8N7X2 389 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 CDRT4Q8N9R6 151 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 MRPL32Q9BYC8 188 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 MYADML2A6NDP7 307 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 FRG2CA6NGY1 282 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 PLPP3O14495 311 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 MRPL33O75394 65 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 PPP1R3DO95685 299 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 CENPWQ5EE01 88 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 SLC23A3Q6PIS1 610 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 SLC25A38Q96DW6 304 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 USF3Q68DE3 2245 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 HELZP42694 1942 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 TRAV8-6A0A0B4J262 113 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 SHISA9B4DS77 424 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM157BP0CG42 384 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 LINC00596Q86U02 117 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZMAT3Q9HA38 289 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 FRRS1LQ9P0K9 344 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms