RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 RPEL1Q2QD12 228 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.54■□□□□ 0.72
TSKU-201ENST00000333090 ERVK-16P61578 105 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 WDR82Q6UXN9 313 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 MRPL52Q86TS9 123 aaKnown RBP19.54■□□□□ 0.72
TSKU-201ENST00000333090 OR8I2Q8N0Y5 310 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 EAF1Q96JC9 268 aaPredicted RBP19.54■□□□□ 0.72
TSKU-201ENST00000333090 KRTDAPP60985 99 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 AARDQ4LEZ3 155 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 STPG3Q8N7X2 389 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 C1orf159Q96HA4 380 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 LPAR2Q9HBW0 351 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 NPVFQ9HCQ7 196 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 FZR1Q9UM11 496 aa19.54■□□□□ 0.72
TSKU-201ENST00000333090 RPL39P5Q59GN2 51 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 DEFB123Q8N688 67 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 SIGLECL1Q8N7X8 197 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 OR4P4Q8NGL7 312 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 UHRF2Q96PU4 802 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 RNF114Q9Y508 228 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 TET2Q6N021 2002 aaPredicted RBP19.53■□□□□ 0.72
TSKU-201ENST00000333090 C9orf172C9J069 976 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 TMPRSS3P57727 454 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 RHOBP62745 196 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 HTD2P86397 168 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 RBM14Q96PK6 669 aaKnown RBP19.53■□□□□ 0.72
TSKU-201ENST00000333090 PTPRBP23467 1997 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 C15orf65H3BRN8 121 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 ADH4P08319 380 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 COMPP49747 757 aaPredicted RBP19.53■□□□□ 0.72
TSKU-201ENST00000333090 PEAR1Q5VY43 1037 aaPredicted RBP19.53■□□□□ 0.72
TSKU-201ENST00000333090 ST6GALNAC3Q8NDV1 305 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 PRR7Q8TB68 274 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 FBXL7Q9UJT9 491 aa19.53■□□□□ 0.72
TSKU-201ENST00000333090 LSM4Q9Y4Z0 139 aaKnown RBP19.53■□□□□ 0.72
TSKU-201ENST00000333090 C19orf67A6NJJ6 358 aa19.52■□□□□ 0.72
TSKU-201ENST00000333090 IGHV1-2P23083 117 aa19.52■□□□□ 0.72
TSKU-201ENST00000333090 RELBQ01201 579 aa19.52■□□□□ 0.72
TSKU-201ENST00000333090 ARSJQ5FYB0 599 aaPredicted RBP19.52■□□□□ 0.72
TSKU-201ENST00000333090 GNB4Q9HAV0 340 aa19.52■□□□□ 0.72
TSKU-201ENST00000333090 TNFSF15O95150 251 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 CGAP01215 116 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 Q0VG73 95 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 GCNT2Q8N0V5 402 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 CXXC4Q9H2H0 198 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 TMEM140Q9NV12 185 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 NAT8BQ9UHF3 227 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 TCF19Q9Y242 345 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 V9GYV3 84 aa19.52■□□□□ 0.71
TSKU-201ENST00000333090 C9JCJ5 164 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 ACTL6BO94805 426 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 MT-CO2P00403 227 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 SP1P08047 785 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 SMIM21Q3B7S5 101 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 TEPPQ6URK8 271 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 TRGV10A0A0A0MS01 117 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 FAM90A9PA6NNJ1 464 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 SLC35B1P78383 322 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 OR52E5Q8NH55 327 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 C11orf52Q96A22 123 aa19.51■□□□□ 0.71
TSKU-201ENST00000333090 DMXL1Q9Y485 3027 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 ZNF891A8MT65 544 aaPredicted RBP19.5■□□□□ 0.71
TSKU-201ENST00000333090 ARG2P78540 354 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 GAGE1Q13065 139 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 KIAA1644Q3SXP7 199 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 ZNF586Q9NXT0 402 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 TIMM8AO60220 97 aaPredicted RBP19.5■□□□□ 0.71
TSKU-201ENST00000333090 CD177Q8N6Q3 437 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 SPRR3Q9UBC9 169 aa19.5■□□□□ 0.71
TSKU-201ENST00000333090 GPX1P07203 203 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 TFPI2P48307 235 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 DOLPP1Q86YN1 238 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 KLF13Q9Y2Y9 288 aaPredicted RBP19.49■□□□□ 0.71
TSKU-201ENST00000333090 TBL2Q9Y4P3 447 aaKnown RBP19.49■□□□□ 0.71
TSKU-201ENST00000333090 DIRC3C9JPN6 131 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 KLRC4-KLRK1H3BQV0 150 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 AGFG2O95081 481 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 GNG4P50150 75 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 FABP6P51161 128 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 MORN2Q502X0 79 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 CENPWQ5EE01 88 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 S1PR3Q99500 378 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 GNB1LQ9BYB4 327 aa19.49■□□□□ 0.71
TSKU-201ENST00000333090 LNP1A1A4G5 178 aa19.48■□□□□ 0.71
TSKU-201ENST00000333090 ATP1A1-AS1Q5TC04 95 aa19.48■□□□□ 0.71
TSKU-201ENST00000333090 OPN3Q9H1Y3 402 aaPredicted RBP19.48■□□□□ 0.71
TSKU-201ENST00000333090 AMTP48728 403 aa19.48■□□□□ 0.71
TSKU-201ENST00000333090 MIR17HGQ75NE6 70 aa19.48■□□□□ 0.71
TSKU-201ENST00000333090 ZPBPQ9BS86 351 aa19.48■□□□□ 0.71
TSKU-201ENST00000333090 RNASE7Q9H1E1 156 aaKnown RBP19.48■□□□□ 0.71
TSKU-201ENST00000333090 LY96Q9Y6Y9 160 aa19.48■□□□□ 0.71
TSKU-201ENST00000333090 ACP1P24666 158 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 CRYBB3P26998 211 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 TCL1AP56279 114 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 FXYD3Q14802 87 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 PQLC2Q6ZP29 291 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 PPP1R14DQ9NXH3 145 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 HELTA6NFD8 242 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 IGFBP2P18065 325 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 PMCHP20382 165 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms