RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ARF1P84077 181 aaKnown RBP15.17■□□□□ 0.02
PKP3-201ENST00000331563 CEACAM16Q2WEN9 425 aa15.17■□□□□ 0.02
PKP3-201ENST00000331563 PPP1R32Q7Z5V6 425 aa15.17■□□□□ 0.02
PKP3-201ENST00000331563 ST6GALNAC3Q8NDV1 305 aa15.17■□□□□ 0.02
PKP3-201ENST00000331563 FOXB1Q99853 325 aa15.17■□□□□ 0.02
PKP3-201ENST00000331563 TRAPPC2LQ9UL33 140 aa15.17■□□□□ 0.02
PKP3-201ENST00000331563 RAMP3O60896 148 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 ZNF324O75467 553 aaPredicted RBP15.16■□□□□ 0.02
PKP3-201ENST00000331563 RBPJQ06330 500 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 FAM58AQ8N1B3 248 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 TRAV9-1A0A075B6T8 112 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 DRAM1Q8N682 238 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.16■□□□□ 0.02
PKP3-201ENST00000331563 CRIM1Q9NZV1 1036 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 NCKAP5O14513 1909 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 GVINP1Q7Z2Y8 2422 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 A6NJY4 79 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 CCL2P13500 99 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 SRIP30626 198 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 LGALS7P47929 136 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 RPL31P62899 125 aaKnown RBP15.16■□□□□ 0.02
PKP3-201ENST00000331563 PSG7Q13046 419 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 TCF24Q7RTU0 167 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 AAED1Q7RTV5 226 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 FADS6Q8N9I5 356 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 SARAFQ96BY9 339 aa15.16■□□□□ 0.02
PKP3-201ENST00000331563 PCSK5Q92824 1860 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 A0A0J9YW62 118 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 LRRC30A6NM36 301 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 K7EN84 100 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 S1PR2O95136 353 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 IGHV3-9P01782 118 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 TCL1AP56279 114 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 PAX2Q02962 417 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 C6orf15Q6UXA7 325 aaPredicted RBP15.15■□□□□ 0.02
PKP3-201ENST00000331563 MRPL21Q7Z2W9 205 aaKnown RBP15.15■□□□□ 0.02
PKP3-201ENST00000331563 YRDCQ86U90 279 aaKnown RBP15.15■□□□□ 0.02
PKP3-201ENST00000331563 ZNF808Q8N4W9 903 aaPredicted RBP15.15■□□□□ 0.02
PKP3-201ENST00000331563 FGF23Q9GZV9 251 aaPredicted RBP15.15■□□□□ 0.02
PKP3-201ENST00000331563 TRAV24A0A0B4J272 114 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 OR7C2O60412 319 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 PCBD1P61457 104 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 SAMD13Q5VXD3 122 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 GNB1LQ9BYB4 327 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 SRXN1Q9BYN0 137 aa15.15■□□□□ 0.02
PKP3-201ENST00000331563 GOSR1O95249 250 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 RFPL3SP0C7P2 107 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 PMCHL1Q16048 86 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 TMEM186Q96B77 213 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 TRBV9A0A0B4J1U6 114 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 PMS2P5A8MQ11 134 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 G3V4G9 280 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 ZIC3O60481 467 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 CA2P00918 260 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 NTF4P34130 210 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 PDLIM3Q53GG5 364 aaPredicted RBP15.14■□□□□ 0.01
PKP3-201ENST00000331563 MPV17L2Q567V2 206 aa15.14■□□□□ 0.01
PKP3-201ENST00000331563 Q56UQ5 140 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 OR10J3Q5JRS4 329 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 CPT1CQ8TCG5 803 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 DLL3Q9NYJ7 618 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 CD1BP29016 333 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 CEACAM21Q3KPI0 293 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 SPINK14Q6IE38 97 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 SFXN3Q9BWM7 321 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 DEPPQ9NTK1 212 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 COL27A1Q8IZC6 1860 aaPredicted RBP15.13■□□□□ 0.01
PKP3-201ENST00000331563 ZNF318Q5VUA4 2279 aa15.13■□□□□ 0.01
PKP3-201ENST00000331563 PLA2G2CQ5R387 149 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 MRPL54Q6P161 138 aaKnown RBP15.12■□□□□ 0.01
PKP3-201ENST00000331563 WDR73Q6P4I2 378 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 VASH2Q86V25 355 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 FREM1Q5H8C1 2179 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 MUC6Q6W4X9 2439 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 GJE1A6NN92 205 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 TNFSF15O95150 251 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 PSG9Q00887 426 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 C9orf135Q5VTT2 229 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 USF3Q68DE3 2245 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 TRAV9-2A0A087WT02 112 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 SAA2-SAA4A0A096LPE2 208 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 CXorf1O96002 111 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 REG1AP05451 166 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 LIFP15018 202 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 FER1L6-AS1Q8NA97 138 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 TXNDC17Q9BRA2 123 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 CLEC7AQ9BXN2 247 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 CHODLQ9H9P2 273 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 WASHC3Q9Y3C0 194 aa15.12■□□□□ 0.01
PKP3-201ENST00000331563 YTHDF2Q9Y5A9 579 aaKnown RBP15.12■□□□□ 0.01
PKP3-201ENST00000331563 CACNA1GO43497 2377 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.11■□□□□ 0.01
PKP3-201ENST00000331563 MT-ND6P03923 174 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 RELBQ01201 579 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 FXYD3Q14802 87 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 C19orf35Q6ZS72 473 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 H2BFWTQ7Z2G1 175 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 HES7Q9BYE0 225 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 CEP250Q9BV73 2442 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms