RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 ASPHD1Q5U4P2 390 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 C12orf54Q6X4T0 127 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 LYG2Q86SG7 212 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 ZNF695Q8IW36 515 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 SLC35G3Q8N808 338 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 ZNF747Q9BV97 191 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 TMEM14BQ9NUH8 114 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 COL6A5A8TX70 2615 aa12.58□□□□□ -0.39
LRRC28-202ENST00000331450 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 DBX1A6NMT0 343 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 TEX22C9J3V5 150 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 ACTL6BO94805 426 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 VDAC1P21796 283 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
LRRC28-202ENST00000331450 IZUMO4Q1ZYL8 232 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 AKIRIN2Q53H80 203 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 LGI3Q8N145 548 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 MINDY2Q8NBR6 621 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 LFNGQ8NES3 379 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 ABHD5Q8WTS1 349 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 LSM10Q969L4 123 aaKnown RBP12.58□□□□□ -0.4
LRRC28-202ENST00000331450 CITED1Q99966 193 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 GON7Q9BXV9 100 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 SHPKQ9UHJ6 478 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
LRRC28-202ENST00000331450 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
LRRC28-202ENST00000331450 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 SOX15O60248 233 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 SNAPC5O75971 98 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
LRRC28-202ENST00000331450 IGHG4P01861 327 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 OR2B8PP59922 312 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 SLC35B1P78383 322 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 SRSF4Q08170 494 aaKnown RBP12.57□□□□□ -0.4
LRRC28-202ENST00000331450 DCTN2Q13561 401 aaKnown RBP12.57□□□□□ -0.4
LRRC28-202ENST00000331450 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 C4orf46Q504U0 113 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 TCTEX1D4Q5JR98 221 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
LRRC28-202ENST00000331450 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 OR5AU1Q8NGC0 362 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 RRNAD1Q96FB5 475 aaKnown RBP12.57□□□□□ -0.4
LRRC28-202ENST00000331450 SPIN2AQ99865 258 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 SPIN2BQ9BPZ2 258 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 COMMD5Q9GZQ3 224 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 PRNDQ9UKY0 176 aa12.57□□□□□ -0.4
LRRC28-202ENST00000331450 A0A0B4J293 547 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 MSGN1A6NI15 193 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 PTTG1O95997 202 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 IGLV1-40P01703 118 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 TMEM267Q0VDI3 215 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-202ENST00000331450 AARDQ4LEZ3 155 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 UNQ5815/PRO19632Q6UWF5 114 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 Q6ZRM9 215 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 LYZL2Q7Z4W2 148 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 ZNF429Q86V71 674 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 COMMD1Q8N668 190 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 C3orf56Q8N813 242 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 RNF152Q8N8N0 203 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 OR52B4Q8NGK2 314 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 ZNF257Q9Y2Q1 563 aa12.56□□□□□ -0.4
LRRC28-202ENST00000331450 TEX50A0A1B0GTY4 177 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 A0A1W2PN81 502 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 FBXO24O75426 580 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 CD28P10747 220 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 SPNP16150 400 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 PSMB8P28062 276 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 CHRNA7P36544 502 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 RAB25P57735 213 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 THOC7Q6I9Y2 204 aaKnown RBP12.55□□□□□ -0.4
LRRC28-202ENST00000331450 PLET1Q6UQ28 207 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 OR5B3Q8NH48 314 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 SPATA3Q8NHX4 192 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
LRRC28-202ENST00000331450 MITD1Q8WV92 249 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 OR51B2Q9Y5P1 312 aa12.55□□□□□ -0.4
LRRC28-202ENST00000331450 IGLC7A0M8Q6 106 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 HMX3A6NHT5 357 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 OPN1MWP04001 364 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 IL5P05113 134 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 APELAP0DMC3 54 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 CD83Q01151 205 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 FOXE3Q13461 319 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 SHISA2Q6UWI4 295 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 OR5M8Q8NGP6 311 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms