RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 SEMA5BQ9P283 1151 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A0A0G2JMM0 328 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A0A1W2PPB8 328 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A0A1W2PRS3 328 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 KIR3DP1A8MWS1 328 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 AMY1AP04745 511 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 WDR54Q9H977 334 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 HSPB8Q9UJY1 196 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 ZSWIM8A7E2V4 1837 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A6NDN8 102 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A8MWP6 167 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 NDUFB3O43676 98 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 TDHQ8IZJ6 230 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 SMRP1Q8NCR6 262 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 MBD3L1Q8WWY6 194 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 TMEM208Q9BTX3 173 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
EPHB3-201ENST00000330394 PLPPR1Q8TBJ4 325 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 TTTY12Q9BZ98 90 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 A0A1W2PR77 199 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 CEACAM18A8MTB9 384 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 CA1P00915 261 aaPredicted RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 CELA3AP09093 270 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 TRA2AQ13595 282 aaKnown RBP eCLIP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 OR1L8Q8NGR8 309 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 OR5P3Q8WZ94 311 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 IGFBP2P18065 325 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 HSPE1P61604 102 aaKnown RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 ACSF3Q4G176 576 aaPredicted RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 SLC35E4Q6ICL7 350 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 ZADH2Q8N4Q0 377 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 ALKBH7Q9BT30 221 aaPredicted RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 LIME1Q9H400 295 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 TMEM50AO95807 157 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 C8orf88P0DMB2 117 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 TMEM177Q53S58 311 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 TEX38Q6PEX7 206 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 SAXO1Q8IYX7 474 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 WBP1Q96G27 269 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 SSBP4Q9BWG4 385 aaPredicted RBP11.86□□□□□ -0.51
EPHB3-201ENST00000330394 CFHR5Q9BXR6 569 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 PKIBQ9C010 78 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
EPHB3-201ENST00000330394 PLP1P60201 277 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 UNQ5815/PRO19632Q6UWF5 114 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 C19orf35Q6ZS72 473 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 ZNRF1Q8ND25 227 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 NFAM1Q8NET5 270 aaPredicted RBP11.85□□□□□ -0.51
EPHB3-201ENST00000330394 SNHG12Q9BXW3 62 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 F11RQ9Y624 299 aaKnown RBP11.85□□□□□ -0.51
EPHB3-201ENST00000330394 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 GNB2P62879 340 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 PRDM13Q9H4Q3 707 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 ZNF207O43670 478 aaKnown RBP11.85□□□□□ -0.51
EPHB3-201ENST00000330394 CLPSP04118 112 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 RND2P52198 227 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 RIGQ13278 110 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 ZNF324BQ6AW86 544 aaPredicted RBP11.85□□□□□ -0.51
EPHB3-201ENST00000330394 Q6ZRM9 215 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
EPHB3-201ENST00000330394 CCL13Q99616 98 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 ASCL3Q9NQ33 180 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
EPHB3-201ENST00000330394 OR4C46A6NHA9 309 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 B4E171 279 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 TSPAN7P41732 249 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 CCL8P80075 99 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 NGBQ9NPG2 151 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 DCAF16Q9NXF7 216 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 MGST3O14880 152 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 COX6A1P12074 109 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 TNFRSF1AP19438 455 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
EPHB3-201ENST00000330394 FOXG1P55316 489 aaPredicted RBP11.84□□□□□ -0.51
EPHB3-201ENST00000330394 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 BEND2Q8NDZ0 799 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 PPIAL4AQ9Y536 164 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 TTC28Q96AY4 2481 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 NCBP2LA6PVI3 153 aaKnown RBP11.84□□□□□ -0.51
EPHB3-201ENST00000330394 ORM1P02763 201 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 REG1AP05451 166 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
EPHB3-201ENST00000330394 GCSHP23434 173 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 MAFAQ8NHW3 353 aaPredicted RBP11.84□□□□□ -0.51
EPHB3-201ENST00000330394 PERPQ96FX8 193 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms