RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CNN1P51911 297 aaKnown RBP12.68□□□□□ -0.38
BRCC3-201ENST00000330045 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 TMEM144Q7Z5S9 345 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 TMEM18Q96B42 140 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 STARD4Q96DR4 205 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 NPVFQ9HCQ7 196 aa12.68□□□□□ -0.38
BRCC3-201ENST00000330045 HEATR1Q9H583 2144 aaKnown RBP12.68□□□□□ -0.38
BRCC3-201ENST00000330045 NBEAQ8NFP9 2946 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 PAX1P15863 534 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 FOXC1Q12948 553 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 FOXL1Q12952 345 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 IGFL2Q6UWQ7 119 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 SFRP2Q96HF1 295 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 CALYQ9NYX4 217 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 TRGV8A0A0C4DH27 118 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 MKRN2OSH3BPM6 223 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 SLC31A2O15432 143 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 RPL15P61313 204 aaKnown RBP12.67□□□□□ -0.38
BRCC3-201ENST00000330045 C1orf229Q6ZS94 237 aaPredicted RBP12.67□□□□□ -0.38
BRCC3-201ENST00000330045 OR4S2Q8NH73 311 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 SSMEM1Q8WWF3 244 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 DDB2Q92466 427 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 OR2V2Q96R30 315 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 SLC25A15Q9Y619 301 aa12.67□□□□□ -0.38
BRCC3-201ENST00000330045 TRBV20OR9-2A0A075B6H5 130 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 MDFIC2A0A1B0GVS7 189 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF705GA8MUZ8 300 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-201ENST00000330045 AHRRA9YTQ3 701 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 CGAP01215 116 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 SPRNQ5BIV9 151 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 ALKBH2Q6NS38 261 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 MOGAT3Q86VF5 341 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 C1orf159Q96HA4 380 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 TMEM204Q9BSN7 226 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
BRCC3-201ENST00000330045 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 C15orf61A6NNL5 157 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 RAB7AP51149 207 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF664Q8N3J9 261 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 FAM169BQ8N8A8 192 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 LEAP2Q969E1 77 aa12.66□□□□□ -0.38
BRCC3-201ENST00000330045 RP1L1Q8IWN7 2480 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-201ENST00000330045 TET2Q6N021 2002 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-201ENST00000330045 IL6RP08887 468 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-201ENST00000330045 UTF1Q5T230 341 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 INTS1Q8N201 2190 aaKnown RBP12.65□□□□□ -0.38
BRCC3-201ENST00000330045 IGF2RP11717 2491 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 CGB3P0DN86 165 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 CGB7P0DN87 165 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 CCKARP32238 428 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 ZNF83P51522 516 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 ARSJQ5FYB0 599 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-201ENST00000330045 TEPPQ6URK8 271 aa12.65□□□□□ -0.38
BRCC3-201ENST00000330045 MRPL41Q8IXM3 137 aaKnown RBP12.65□□□□□ -0.38
BRCC3-201ENST00000330045 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 NPY1RP25929 384 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 EFNB3Q15768 340 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 CT45A1Q5HYN5 189 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 GBGT1Q8N5D6 347 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 CT45A3Q8NHU0 189 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 OCC1Q8TAD7 63 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 NOL4LQ96MY1 436 aaPredicted RBP12.64□□□□□ -0.39
BRCC3-201ENST00000330045 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
BRCC3-201ENST00000330045 A8MWP6 167 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 LHBP01229 141 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 GCHFRP30047 84 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 HSPE1P61604 102 aaKnown RBP12.64□□□□□ -0.39
BRCC3-201ENST00000330045 OR4A47Q6IF82 309 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 STPG3Q8N7X2 389 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
BRCC3-201ENST00000330045 SEPSECSQ9HD40 501 aaKnown RBP12.64□□□□□ -0.39
BRCC3-201ENST00000330045 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
BRCC3-201ENST00000330045 RELNP78509 3460 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 M0R1B8 84 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SPRY3O43610 288 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 CEACAM4O75871 244 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SAA2P0DJI9 122 aaPredicted RBP12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SELLP14151 372 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 RHOBP62745 196 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 CHODLQ9H9P2 273 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 RAB9BQ9NP90 201 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 ENY2Q9NPA8 101 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 TMEM14BQ9NUH8 114 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 HNF1AP20823 631 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 TIMP3P35625 211 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 THBS3P49746 956 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
BRCC3-201ENST00000330045 RAB31Q13636 194 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 FAM201AQ5SY85 155 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SPATA31B1PQ5VZV4 182 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 SEM1Q6ZVN7 128 aa12.63□□□□□ -0.39
BRCC3-201ENST00000330045 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms