RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MED6O75586 246 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 DEDDO75618 318 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 MAS1LP35410 378 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 POLR2GP62487 172 aaKnown RBP eCLIP8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 PLGLAQ15195 96 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 C11orf87Q6NUJ2 197 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 PRSS54Q6PEW0 395 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 PPP1R27Q86WC6 154 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 THAP6Q8TBB0 222 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 ZNF48Q96MX3 618 aaPredicted RBP8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 RBM14Q96PK6 669 aaKnown RBP8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 MAGT1Q9H0U3 335 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 TET2Q6N021 2002 aaPredicted RBP8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 TNCP24821 2201 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
VIPAS39-201ENST00000327028 WRBO00258 174 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 OR2F2O95006 317 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 RLN2P04090 185 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 SPCS3P61009 180 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 HSPE1P61604 102 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 Q6YL49 198 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 OR5B3Q8NH48 314 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 RNF126Q9BV68 326 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 OR5AC2Q9NZP5 309 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 PITPNC1Q9UKF7 332 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 FXYD6-FXYD2A0A087WZ82 144 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 NCBP2LA6PVI3 153 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 SYNGR2O43760 224 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 SSSCA1O60232 199 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 IFNA17P01571 189 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 IER3P46695 156 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 PJVKQ0ZLH3 352 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 CLEC9AQ6UXN8 241 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 NOXA1Q86UR1 476 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 OR11H4Q8NGC9 324 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 SLC25A33Q9BSK2 321 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 RBKSQ9H477 322 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 MOB4Q9Y3A3 225 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 SVEP1Q4LDE5 3571 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 TEX50A0A1B0GTY4 177 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 IGHV4-59P01825 116 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 MYOD1P15172 320 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 PVALBP20472 110 aaPredicted RBP8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 C16orf82Q7Z2V1 217 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 Q8N9W7 124 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 OR1L8Q8NGR8 309 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 HYLS1Q96M11 299 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 RAB40CQ96S21 281 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
VIPAS39-201ENST00000327028 MXRA5Q9NR99 2828 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 ANK3Q12955 4377 aaKnown RBP8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 CYSRT1A8MQ03 144 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 CEBPZOSA8MTT3 80 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 E5RGE8 158 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 FGF16O43320 207 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 COMPP49747 757 aaPredicted RBP8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 PRCDQ00LT1 54 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 SCGB2A2Q13296 93 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 LY6EQ16553 131 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 TMEM219Q86XT9 240 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 DTD1Q8TEA8 209 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 SSMEM1Q8WWF3 244 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 CLCC1Q96S66 551 aa8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 PAIP2BQ9ULR5 123 aaKnown RBP8.15□□□□□ -1.1
VIPAS39-201ENST00000327028 HIVEP2P31629 2446 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 BTBD17A6NE02 478 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 HMSDA8MTL9 139 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 L7N2F9 121 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 CHST1O43916 411 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 ACTL6BO94805 426 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 LY86O95711 162 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 CA2P00918 260 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 HLA-DRB1P01911 266 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 HOXA1P49639 335 aaPredicted RBP8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 VAMP2P63027 116 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 TNXAQ16473 311 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 SPINK9Q5DT21 86 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 C10orf55Q5SWW7 151 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 C5orf56Q8N8D9 126 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 DCUN1D4Q92564 292 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 CIB3Q96Q77 187 aaPredicted RBP8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 CDC42EP3Q9UKI2 254 aa8.15□□□□□ -1.11
VIPAS39-201ENST00000327028 FCN1O00602 326 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 GPR137BO60478 399 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 IAPPP10997 89 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 RPL27AP46776 148 aaKnown RBP8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 P2RY1P47900 373 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 TAS2R30P59541 319 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 GNB1P62873 340 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 SIGLECL1Q8N7X8 197 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 GRPEL2Q8TAA5 225 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 RASL11BQ9BPW5 248 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 PLEKHA3Q9HB20 300 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms