RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PPP1R2P9O14990 202 aa18.33■□□□□ 0.52
PNKP-201ENST00000322344 CTAG1AP78358 180 aa18.33■□□□□ 0.52
PNKP-201ENST00000322344 OR51G1Q8NGK1 321 aa18.33■□□□□ 0.52
PNKP-201ENST00000322344 OR51M1Q9H341 326 aa18.33■□□□□ 0.52
PNKP-201ENST00000322344 SLC35D1Q9NTN3 355 aa18.33■□□□□ 0.52
PNKP-201ENST00000322344 HCFC1P51610 2035 aa18.33■□□□□ 0.52
PNKP-201ENST00000322344 PHOX2AO14813 284 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 TMPRSS2O15393 492 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 ATP5IP56385 69 aaPredicted RBP18.32■□□□□ 0.52
PNKP-201ENST00000322344 B2MP61769 119 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 ADIPOQQ15848 244 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 DSCAMO60469 2012 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 DPRXA6NFQ7 191 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 IFITM10A6NMD0 228 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 UPK2O00526 184 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 MMP23AO75900 390 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 CA2P00918 260 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 FABP1P07148 127 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 OR4A8P0C604 315 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 CT45A6P0DMU7 189 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 CT45A5P0DMU8 189 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 CT45A7P0DMV0 189 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 NDUFB7P17568 137 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 NPPCP23582 126 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 ARSJQ5FYB0 599 aaPredicted RBP18.32■□□□□ 0.52
PNKP-201ENST00000322344 CST9LP1Q5W188 147 aa18.32■□□□□ 0.52
PNKP-201ENST00000322344 SRP14P37108 136 aaKnown RBP18.31■□□□□ 0.52
PNKP-201ENST00000322344 RPL29P47914 159 aaKnown RBP18.31■□□□□ 0.52
PNKP-201ENST00000322344 CCL8P80075 99 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 PRCDQ00LT1 54 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 ABHD17AQ96GS6 310 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 C1orf159Q96HA4 380 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 PLEKHA3Q9HB20 300 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 FKBP11Q9NYL4 201 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 JKAMPQ9P055 326 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 SLC25A10Q9UBX3 287 aaPredicted RBP18.31■□□□□ 0.52
PNKP-201ENST00000322344 SVILO95425 2214 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 LOC400499M0QZD8 3231 aa18.31■□□□□ 0.52
PNKP-201ENST00000322344 ARL14EPLP0DKL9 152 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 CD99P14209 185 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 UBE2G2P60604 165 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 GNB1P62873 340 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 DCAF16Q9NXF7 216 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 DSCAML1Q8TD84 2053 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 TANC2Q9HCD6 1990 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 VSTM5A8MXK1 200 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 J3QR06 171 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 ATP5G3P48201 142 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 RHOBP62745 196 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 ZNF833PQ6ZTB9 187 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 HIST3H2BBQ8N257 126 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 GSN-AS1Q9NRJ2 163 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 BET1LQ9NYM9 111 aa18.3■□□□□ 0.52
PNKP-201ENST00000322344 RAI1Q7Z5J4 1906 aaPredicted RBP18.3■□□□□ 0.52
PNKP-201ENST00000322344 NEUROG1Q92886 237 aa18.29■□□□□ 0.52
PNKP-201ENST00000322344 TP53TG5Q9Y2B4 290 aa18.29■□□□□ 0.52
PNKP-201ENST00000322344 PRRC2CQ9Y520 2896 aaKnown RBP18.29■□□□□ 0.52
PNKP-201ENST00000322344 PPP5D1E7EU14 171 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 THBDP07204 575 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 BSPH1Q075Z2 132 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 GFRALQ6UXV0 394 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 STPG3Q8N7X2 389 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 NECAP1Q8NC96 275 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 HINT2Q9BX68 163 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 MT-CO2P00403 227 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 RPL31P62899 125 aaKnown RBP18.28■□□□□ 0.52
PNKP-201ENST00000322344 LINC01551Q86U37 167 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 OSR1Q8TAX0 266 aaPredicted RBP18.28■□□□□ 0.52
PNKP-201ENST00000322344 SSMEM1Q8WWF3 244 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 TMEM204Q9BSN7 226 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 CADP27708 2225 aa18.28■□□□□ 0.52
PNKP-201ENST00000322344 PPIAL4EA0A075B759 164 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 PPIAL4DF5H284 164 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 GGCTO75223 188 aaKnown RBP18.27■□□□□ 0.52
PNKP-201ENST00000322344 APOA2P02652 100 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 PPIAL4FP0DN26 164 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 FAM3BP58499 235 aaPredicted RBP18.27■□□□□ 0.52
PNKP-201ENST00000322344 KCNIP4Q6PIL6 250 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 OR5B3Q8NH48 314 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 OR4X1Q8NH49 305 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 SNRNP40Q96DI7 357 aaKnown RBP18.27■□□□□ 0.52
PNKP-201ENST00000322344 ZNF714Q96N38 554 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 SAP30LQ9HAJ7 183 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 MIOXQ9UGB7 285 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 PITPNC1Q9UKF7 332 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 ZNF835Q9Y2P0 537 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 PPIAL4AQ9Y536 164 aa18.27■□□□□ 0.52
PNKP-201ENST00000322344 CNOT1A5YKK6 2376 aaKnown RBP18.27■□□□□ 0.51
PNKP-201ENST00000322344 NDUFB4O95168 129 aa18.27■□□□□ 0.51
PNKP-201ENST00000322344 EFNB3Q15768 340 aa18.27■□□□□ 0.51
PNKP-201ENST00000322344 OR2T10Q8NGZ9 312 aa18.27■□□□□ 0.51
PNKP-201ENST00000322344 BTF3L4Q96K17 158 aa18.27■□□□□ 0.51
PNKP-201ENST00000322344 TET2Q6N021 2002 aaPredicted RBP18.26■□□□□ 0.51
PNKP-201ENST00000322344 SOD3P08294 240 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 GCHFRP30047 84 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 PRR20EP86478 221 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 PRR20CP86479 221 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 PRR20DP86480 221 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 PRR20BP86481 221 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 PRR20AP86496 221 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms