RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 DEFB103AP81534 67 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 GAB4Q2WGN9 574 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 ANKRD33Q7Z3H0 272 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 ELSPBP1Q96BH3 223 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 DYNLRB1Q9NP97 96 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 HRKO00198 91 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 PSG1P11464 419 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 DLX1P56177 255 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 TBR1Q16650 682 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 CEACAM21Q3KPI0 293 aa6.05□□□□□ -1.44
SMC1A-201ENST00000322213 K7EP13 123 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 CEACAM1P13688 526 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 DUSP2Q05923 314 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM249Q2WGJ8 235 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 RNASE8Q8TDE3 154 aaKnown RBP6.04□□□□□ -1.44
SMC1A-201ENST00000322213 COL4A5P29400 1685 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 IGHV2-70DA0A0C4DH43 119 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM50AO95807 157 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM178AQ8NBL3 297 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 OR2Z1Q8NG97 314 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 KCNK17Q96T54 332 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 IGLV1-36A0A0B4J1U3 117 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 SHISA8B8ZZ34 492 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 HSD52Q0P140 79 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 ZAR1Q86SH2 424 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 ST6GALNAC6Q969X2 333 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 IL6RP08887 468 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-201ENST00000322213 SCTP09683 121 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 MIC13Q5XKP0 118 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 OR4D5Q8NGN0 318 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 CA7P43166 264 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 RPL30P62888 115 aaKnown RBP6.04□□□□□ -1.44
SMC1A-201ENST00000322213 FHL5Q5TD97 284 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 RBPMS2Q6ZRY4 209 aaKnown RBP6.04□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM230Q96A57 120 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 FAM131CQ96AQ9 280 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 CYTL1Q9NRR1 136 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 OR9G4Q8NGQ1 327 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 OR5P3Q8WZ94 311 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 ATP5L2Q7Z4Y8 100 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 MUC15Q8N387 334 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 THYN1Q9P016 225 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 HIGD1AQ9Y241 93 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 HCFC2Q9Y5Z7 792 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 BDP1A6H8Y1 2624 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 PIEZO2Q9H5I5 2752 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 ABCA2Q9BZC7 2435 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 TSPAN2O60636 221 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 GCHFRP30047 84 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 ACSF3Q4G176 576 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-201ENST00000322213 GFI1Q99684 422 aa6.04□□□□□ -1.44
SMC1A-201ENST00000322213 IGHV3-64DA0A0J9YX35 117 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CCL25O15444 150 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CXorf67Q86X51 503 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-201ENST00000322213 FGFRL1Q8N441 504 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 hADV38S2A0JD32 116 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 FOXL2P58012 376 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 GAGE13Q4V321 117 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 Q6AWC8 147 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 FBLN5Q9UBX5 448 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF785A8K8V0 405 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 LMO7DNF2Z398 122 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 J3QR06 171 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 HOXA4Q00056 320 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-201ENST00000322213 LRTM2Q8N967 370 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CEACAM18A8MTB9 384 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 THY1P04216 161 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF735P0CB33 412 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CFPP27918 469 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 GFERP55789 205 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 OR1L8Q8NGR8 309 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CYSLTR1Q9Y271 337 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 POLR3KQ9Y2Y1 108 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1W2PP11 408 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 H7C2G1 150 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 MRPS11P82912 194 aaKnown RBP6.03□□□□□ -1.44
SMC1A-201ENST00000322213 SFXN3Q9BWM7 321 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 WNT16Q9UBV4 365 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 LTBP2Q14767 1821 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CD160O95971 181 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 PAX2Q02962 417 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 FAM27BQ5VT28 67 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 OR51G1Q8NGK1 321 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 CXXC4Q9H2H0 198 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 H0YIZ8 118 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 MMP23AO75900 390 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 UCP1P25874 307 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 DNM1P46Q6ZS02 220 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 OR2K2Q8NGT1 345 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF502Q8TBZ5 544 aa6.03□□□□□ -1.44
SMC1A-201ENST00000322213 ABHD14AQ9BUJ0 271 aa6.02□□□□□ -1.44
SMC1A-201ENST00000322213 LRRC61Q9BV99 259 aa6.02□□□□□ -1.44
SMC1A-201ENST00000322213 MRPS18CQ9Y3D5 142 aaKnown RBP6.02□□□□□ -1.44
SMC1A-201ENST00000322213 CD27P26842 260 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 CRYBB3P26998 211 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 PEBP1P30086 187 aaKnown RBP6.02□□□□□ -1.45
SMC1A-201ENST00000322213 LINC01551Q86U37 167 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 AMELYQ99218 206 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 KBTBD11-OT1A0A1B0GTJ5 212 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms