RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TSKUQ8WUA8 353 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 OR5P3Q8WZ94 311 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 RAB9BQ9NP90 201 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 HEATR1Q9H583 2144 aaKnown RBP14.03□□□□□ -0.16
PACS1-201ENST00000320580 RALGAPA1Q6GYQ0 2036 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 ZNF83P51522 516 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 FER1L6-AS1Q8NA97 138 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 SCCPDHQ8NBX0 429 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 ZNF501Q96CX3 271 aaPredicted RBP14.03□□□□□ -0.16
PACS1-201ENST00000320580 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.03□□□□□ -0.16
PACS1-201ENST00000320580 A8MWL6 223 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 CDIPTO14735 213 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 IGKV1D-33P01593 117 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 IGKV1-33P01594 117 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 YPEL3P61236 119 aaPredicted RBP14.03□□□□□ -0.16
PACS1-201ENST00000320580 RPL15P61313 204 aaKnown RBP14.03□□□□□ -0.16
PACS1-201ENST00000320580 THYN1Q9P016 225 aa14.03□□□□□ -0.16
PACS1-201ENST00000320580 SPTBN2O15020 2390 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 Q8IYB0 196 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 ZNF114Q8NC26 417 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 OR10W1Q8NGF6 305 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 GOSR1O95249 250 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 ARG2P78540 354 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 ERHP84090 104 aaKnown RBP14.02□□□□□ -0.16
PACS1-201ENST00000320580 STPG3Q8N7X2 389 aa14.02□□□□□ -0.16
PACS1-201ENST00000320580 LRRK1Q38SD2 2015 aa14.02□□□□□ -0.17
PACS1-201ENST00000320580 IGLL1P15814 213 aa14.02□□□□□ -0.17
PACS1-201ENST00000320580 TNFRSF14Q92956 283 aa14.02□□□□□ -0.17
PACS1-201ENST00000320580 PRSS47A8MTI9 375 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 ARR3P36575 388 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 OR1L1Q8NH94 360 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 IGKV1-27A0A075B6S5 117 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 IZUMO1RA6ND01 250 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 SP1P08047 785 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 TBC1D28Q2M2D7 210 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 WIPI1Q5MNZ9 446 aaPredicted RBP14.01□□□□□ -0.17
PACS1-201ENST00000320580 CKS1BP61024 79 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 RAC1P63000 192 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 CEACAM21Q3KPI0 293 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 TPRX1Q8N7U7 411 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 Q8NFD4 153 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 IL36GQ9NZH8 169 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 TCF20Q9UGU0 1960 aaKnown RBP14.01□□□□□ -0.17
PACS1-201ENST00000320580 CD5LO43866 347 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 WISP1O95388 367 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 CLDN14O95500 239 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 SMIM13P0DJ93 91 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 PDPNQ86YL7 162 aa14.01□□□□□ -0.17
PACS1-201ENST00000320580 MCRIP2Q9BUT9 160 aaKnown RBP14.01□□□□□ -0.17
PACS1-201ENST00000320580 EP300Q09472 2414 aaPredicted RBP14□□□□□ -0.17
PACS1-201ENST00000320580 IGHV2-26A0A0B4J1V2 119 aa14□□□□□ -0.17
PACS1-201ENST00000320580 K7EP13 123 aa14□□□□□ -0.17
PACS1-201ENST00000320580 ADH4P08319 380 aa14□□□□□ -0.17
PACS1-201ENST00000320580 TMEM136Q6ZRR5 245 aa14□□□□□ -0.17
PACS1-201ENST00000320580 FLYWCH2Q96CP2 140 aaKnown RBP14□□□□□ -0.17
PACS1-201ENST00000320580 COL4A6Q14031 1691 aa14□□□□□ -0.17
PACS1-201ENST00000320580 ORM2P19652 201 aa14□□□□□ -0.17
PACS1-201ENST00000320580 LHX2P50458 406 aa14□□□□□ -0.17
PACS1-201ENST00000320580 LGALS4P56470 323 aa14□□□□□ -0.17
PACS1-201ENST00000320580 SMRP1Q8NCR6 262 aa14□□□□□ -0.17
PACS1-201ENST00000320580 ZNF837Q96EG3 531 aaPredicted RBP14□□□□□ -0.17
PACS1-201ENST00000320580 SEPSECSQ9HD40 501 aaKnown RBP14□□□□□ -0.17
PACS1-201ENST00000320580 MPC1Q9Y5U8 109 aa14□□□□□ -0.17
PACS1-201ENST00000320580 LAMA2P24043 3122 aaKnown RBP14□□□□□ -0.17
PACS1-201ENST00000320580 AMMECR1Q9Y4X0 333 aaPredicted RBP14□□□□□ -0.17
PACS1-201ENST00000320580 IGKV1-5P01602 117 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 MTURNQ8N3F0 131 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 MS4A5Q9H3V2 200 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 ZNF257Q9Y2Q1 563 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 PLXNA4Q9HCM2 1894 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 J3QT63 122 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 CYC1P08574 325 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 ZFP36L1Q07352 338 aaKnown RBP13.99□□□□□ -0.17
PACS1-201ENST00000320580 ZNF645Q8N7E2 425 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 OR1L4Q8NGR5 311 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 C5orf30Q96GV9 206 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 RNF115Q9Y4L5 304 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 E9PLN8 166 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 FOLR3P41439 243 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 RAC3P60763 192 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 SEC11AP67812 179 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 DCAF12Q5T6F0 453 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 TMEM92Q6UXU6 159 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 ZNF788Q6ZQV5 615 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 GTF3C1Q12789 2109 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 A0A0J9YW62 118 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 SAP30O75446 220 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 SCGB1C2P0DMR2 95 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 HAPLN4Q86UW8 402 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 HES4Q9HCC6 221 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 OSTCQ9NRP0 149 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 MMP17Q9ULZ9 603 aa13.99□□□□□ -0.17
PACS1-201ENST00000320580 SUB1P53999 127 aaKnown RBP eCLIP13.98□□□□□ -0.17
PACS1-201ENST00000320580 SSPNQ14714 243 aa13.98□□□□□ -0.17
PACS1-201ENST00000320580 TMEM116Q8NCL8 245 aa13.98□□□□□ -0.17
PACS1-201ENST00000320580 NABP2Q9BQ15 211 aa13.98□□□□□ -0.17
PACS1-201ENST00000320580 AP5S1Q9NUS5 200 aa13.98□□□□□ -0.17
PACS1-201ENST00000320580 FAM231BA6NCW3 169 aa13.98□□□□□ -0.17
PACS1-201ENST00000320580 OPRK1P41145 380 aa13.98□□□□□ -0.17
PACS1-201ENST00000320580 CXCL12P48061 93 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms