RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 POLR3KQ9Y2Y1 108 aaPredicted RBP6.18□□□□□ -1.42
IFT88-201ENST00000319980 DSCAML1Q8TD84 2053 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 LOC102723971A0A1B0GUV8 181 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 H3BQ15 152 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 BCL2P10415 239 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 RAB11AP62491 216 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 DIAPH2-AS1Q14236 149 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 PDLIM3Q53GG5 364 aaPredicted RBP6.18□□□□□ -1.42
IFT88-201ENST00000319980 TMEM170AQ8WVE7 144 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 KAAG1Q9UBP8 84 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 MLXQ9UH92 298 aa6.18□□□□□ -1.42
IFT88-201ENST00000319980 FOXA2Q9Y261 457 aaPredicted RBP6.18□□□□□ -1.42
IFT88-201ENST00000319980 C17orf112F2Z3M2 114 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 J3QR06 171 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 NDUFA2O43678 99 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 ZNF672Q499Z4 452 aaPredicted RBP6.17□□□□□ -1.42
IFT88-201ENST00000319980 ZNF833PQ6ZTB9 187 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 IQCF2Q8IXL9 164 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 TMPRSS5Q9H3S3 457 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 ENY2Q9NPA8 101 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 WDR83OSQ9Y284 106 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 OR51B2Q9Y5P1 312 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 SPTBN1Q01082 2364 aaKnown RBP6.17□□□□□ -1.42
IFT88-201ENST00000319980 HCFC1P51610 2035 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 COLCA2A8K830 154 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 LY6HO94772 140 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 MBP02144 154 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 MDKP21741 143 aaPredicted RBP6.17□□□□□ -1.42
IFT88-201ENST00000319980 SUMO1P63165 101 aaKnown RBP6.17□□□□□ -1.42
IFT88-201ENST00000319980 POU2AF1Q16633 256 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 SMUG1Q53HV7 270 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 GCSAMLQ5JQS6 135 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 FAM122CQ6P4D5 195 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 TREML4Q6UXN2 200 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 SLC24A4Q8NFF2 622 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 RAB24Q969Q5 203 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 RAB39BQ96DA2 213 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 NIPSNAP3BQ9BS92 247 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 CACNA1BQ00975 2339 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 H0YJW9 148 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 APOA2P02652 100 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 CRYBA1P05813 215 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 SAA1P0DJI8 122 aaPredicted RBP6.17□□□□□ -1.42
IFT88-201ENST00000319980 NPY1RP25929 384 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 DLX1P56177 255 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 PRB3Q04118 309 aaPredicted RBP6.17□□□□□ -1.42
IFT88-201ENST00000319980 RHEBQ15382 184 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 TMEM155Q4W5P6 130 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 Q8N7P7 452 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 OR5AN1Q8NGI8 311 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 HARBI1Q96MB7 349 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 PRNDQ9UKY0 176 aa6.17□□□□□ -1.42
IFT88-201ENST00000319980 ITPR1Q14643 2758 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 MALRD1Q5VYJ5 2156 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 TNCP24821 2201 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 PKD1L2Q7Z442 2459 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 A0A1W2PPE2 198 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 PRSS46E5RG02 174 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 UPK2O00526 184 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 KBTBD11O94819 623 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 CA2P00918 260 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 IGHV1-8P0DP01 117 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 AVPI1Q5T686 147 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 FLYWCH2Q96CP2 140 aaKnown RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 ACTR3CQ9C0K3 210 aaPredicted RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 PLEKHA3Q9HB20 300 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 VAX2Q9UIW0 290 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 RALYQ9UKM9 306 aaKnown RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 CYB5BO43169 146 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 IFNA1P01562 189 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 SFTPCP11686 197 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 TAGLN2P37802 199 aaKnown RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 DLK1P80370 383 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 RBMS3Q6XE24 437 aaKnown RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 C11orf42Q8N5U0 333 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 OSR1Q8TAX0 266 aaPredicted RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 TMEM186Q96B77 213 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 BBC3Q96PG8 261 aaPredicted RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 GGACTQ9BVM4 153 aa6.16□□□□□ -1.42
IFT88-201ENST00000319980 PATZ1Q9HBE1 687 aaKnown RBP6.16□□□□□ -1.42
IFT88-201ENST00000319980 TEX50A0A1B0GTY4 177 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 IL6RP08887 468 aaPredicted RBP6.15□□□□□ -1.42
IFT88-201ENST00000319980 DLX6P56179 175 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 ACOT6Q3I5F7 207 aaPredicted RBP6.15□□□□□ -1.42
IFT88-201ENST00000319980 ARSJQ5FYB0 599 aaPredicted RBP6.15□□□□□ -1.42
IFT88-201ENST00000319980 MIC13Q5XKP0 118 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 FAM24BQ8N5W8 94 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 C15orf54Q8N8G6 183 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 OR4C13Q8NGP0 309 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 OR9G1Q8NH87 305 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 SSMEM1Q8WWF3 244 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 MGST2Q99735 147 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 NPVFQ9HCQ7 196 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 ZNF257Q9Y2Q1 563 aa6.15□□□□□ -1.42
IFT88-201ENST00000319980 A0A1W2PPH5 198 aa6.15□□□□□ -1.43
IFT88-201ENST00000319980 A0A1W2PPV4 95 aa6.15□□□□□ -1.43
IFT88-201ENST00000319980 ZNF727A8MUV8 499 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms