RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 SLC38A11Q08AI6 406 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 MMDQ15546 238 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 SRSF7Q16629 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 KCNIP4Q6PIL6 250 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 ACP7Q6ZNF0 438 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 LINC01551Q86U37 167 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-201ENST00000319854 COMPP49747 757 aaPredicted RBP12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 HBG1P69891 147 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 HBG2P69892 147 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 RAB7AP51149 207 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 LCN2P80188 198 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 OR10G9Q8NGN4 311 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 OR10G7Q8NGN6 311 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
SHROOM1-201ENST00000319854 TRBV6-6A0A0A6YYG2 114 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 S1PR2O95136 353 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 NEIL1Q96FI4 390 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 LIN7CQ9NUP9 197 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 ELOVL5Q9NYP7 299 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 COL6A6A6NMZ7 2263 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 FRMD6-AS1P0C7T7 363 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 COX5AP20674 150 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 GUSBP1Q15486 140 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 C22orf34Q6ZV56 151 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 MOGAT3Q86VF5 341 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 SGMS2Q8NHU3 365 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 YLPM1P49750 1951 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 SERF1AO75920 110 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 NDUFB8O95169 186 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 GNB1P62873 340 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 FAM27E3Q08E93 113 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF474Q6S9Z5 364 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 Q6ZVH6 145 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 MOB1BQ7L9L4 216 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 CD177Q8N6Q3 437 aa12.91□□□□□ -0.34
SHROOM1-201ENST00000319854 CTXND1A0A1B0GTU2 59 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 ZNF891A8MT65 544 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 HNF1AP20823 631 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 CHRNB4P30926 498 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 UBE2G2P60604 165 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 TFF3Q07654 80 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 STPG4Q8N801 248 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 PLSCR4Q9NRQ2 329 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 MBNL3Q9NUK0 354 aaKnown RBP12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 GNG12Q9UBI6 72 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 ZFP30Q9Y2G7 519 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 SLC25A6P12236 298 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 CBLN1P23435 193 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 ATP5G3P48201 142 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 VKORC1L1Q8N0U8 176 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 VAMP8Q9BV40 100 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
SHROOM1-201ENST00000319854 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.35
SHROOM1-201ENST00000319854 NDUFB4O95168 129 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 RBX1P62877 108 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 FFAR4Q5NUL3 377 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 UTF1Q5T230 341 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 IGFL2Q6UWQ7 119 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 MRPL52Q86TS9 123 aaKnown RBP12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 ZCCHC24Q8N2G6 241 aaKnown RBP12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 OR2V2Q96R30 315 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 VENTXO95231 258 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 PRDX2P32119 198 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 AHRRA9YTQ3 701 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 CCL25O15444 150 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 TCF15Q12870 199 aa12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-201ENST00000319854 TRBV20OR9-2A0A075B6H5 130 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 COL5A1-AS1Q5SY13 56 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 ETFRF1Q6IPR1 90 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 WIPI2Q9Y4P8 454 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 FAM215AQ9Y5M1 114 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 SPTAN1Q13813 2472 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 OOEPA6NGQ2 149 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 LINC00473A8K010 186 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 AARDQ4LEZ3 155 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
SHROOM1-201ENST00000319854 THBS3P49746 956 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 TPPP2P59282 170 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 FOXL1Q12952 345 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 TMEM14EPQ6UXP3 125 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 ZNF645Q8N7E2 425 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 FBXL7Q9UJT9 491 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 TNCP24821 2201 aa12.87□□□□□ -0.35
SHROOM1-201ENST00000319854 J3QW42 95 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms