RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 IRF2P14316 349 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 RHOBP62745 196 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 LCN2P80188 198 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 WDR82Q6UXN9 313 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 TMEM140Q9NV12 185 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 NAT8BQ9UHF3 227 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 NAGKQ9UJ70 344 aa8.76□□□□□ -1.01
COL3A1-202ENST00000317840 C15orf62A8K5M9 175 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 A8MWP6 167 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 PSG5Q15238 335 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 DYNLRB1Q9NP97 96 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 M0R143 59 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 FAM87AP0C7U9 286 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 NPY1RP25929 384 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 TPPP2P59282 170 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 DBX2Q6ZNG2 339 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 ZNF114Q8NC26 417 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 VN1R17PQ8TDU5 208 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 NPVFQ9HCQ7 196 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 TCF19Q9Y242 345 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 VSTM5A8MXK1 200 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
COL3A1-202ENST00000317840 MZT1Q08AG7 82 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 TIGITQ495A1 244 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 ACTL10Q5JWF8 245 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 TEPPQ6URK8 271 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 MOGAT3Q86VF5 341 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 FAM216AQ8WUB2 273 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 HSPB9Q9BQS6 159 aa8.75□□□□□ -1.01
COL3A1-202ENST00000317840 TRAV3A0A0B4J244 114 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 SS18L1O75177 396 aaPredicted RBP8.74□□□□□ -1.01
COL3A1-202ENST00000317840 CRYABP02511 175 aaKnown RBP8.74□□□□□ -1.01
COL3A1-202ENST00000317840 FOSL1P15407 271 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 NPPCP23582 126 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 TREML4Q6UXN2 200 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 TCTEX1D1Q8N7M0 179 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 SIGLECL1Q8N7X8 197 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 OCC1Q8TAD7 63 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
COL3A1-202ENST00000317840 PRR33A8MZF0 331 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 MPDU1O75352 247 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 CECR9P0C854 216 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 PMCHP20382 165 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 NTF3P20783 257 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 GNG4P50150 75 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 FAM201AQ5SY85 155 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 OR1L6Q8NGR2 347 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 FAM90A27PA6NNH2 459 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 OR10J4P0C629 311 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 OR10J1P30954 320 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
COL3A1-202ENST00000317840 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 Q6ZR03 302 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 BHLHA15Q7RTS1 189 aaPredicted RBP8.74□□□□□ -1.01
COL3A1-202ENST00000317840 OR8I2Q8N0Y5 310 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 SLC24A4Q8NFF2 622 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 OR4S2Q8NH73 311 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 C5orf30Q96GV9 206 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 TUBG2Q9NRH3 451 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 ARFGEF3Q5TH69 2177 aa8.74□□□□□ -1.01
COL3A1-202ENST00000317840 MUC3AQ02505 3323 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 KIAA1549Q9HCM3 1950 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 J3QW42 95 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 GFRA3O60609 400 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 FAM27E3Q08E93 113 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 OR5I1Q13606 314 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 Q6ZT83 130 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 STPG3Q8N7X2 389 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 H1FXQ92522 213 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 VAMP8Q9BV40 100 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 RBFOX2O43251 390 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 ZNF25P17030 456 aaPredicted RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 GCHFRP30047 84 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 ADMP35318 185 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 CYB5R2Q6BCY4 276 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 SP5Q6BEB4 398 aaPredicted RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 GBGT1Q8N5D6 347 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 MDS2Q8NDY4 140 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 EREGO14944 169 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 MRPS11P82912 194 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 FXYD3Q14802 87 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 SPATA31B1PQ5VZV4 182 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 MRPL54Q6P161 138 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 ASCL5Q7RTU5 278 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 OR5AU1Q8NGC0 362 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 RNASEH2CQ8TDP1 164 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 MRPL37Q9BZE1 423 aaKnown RBP8.73□□□□□ -1.01
COL3A1-202ENST00000317840 GP6Q9HCN6 339 aa8.73□□□□□ -1.01
COL3A1-202ENST00000317840 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL3A1-202ENST00000317840 HELTA6NFD8 242 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 CGAP01215 116 aa8.72□□□□□ -1.01
COL3A1-202ENST00000317840 IL6RP08887 468 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms