RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 SOCS1O15524 211 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 PHF1O43189 567 aaPredicted RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 TNFRSF6BO95407 300 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 AMBPP02760 352 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 MYOD1P15172 320 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 GNG3P63215 75 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 GAGE5Q13069 117 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 GAGE6Q13070 117 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 ODF1Q14990 250 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 PHLDA2Q53GA4 152 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 APOBEC3DQ96AK3 386 aaPredicted RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 KLF13Q9Y2Y9 288 aaPredicted RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 GRIFINA4D1Z8 144 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 CD74P04233 296 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 RPS4Y1P22090 263 aaKnown RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 NAAAQ02083 359 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 COL10A1Q03692 680 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 C9orf153Q5TBE3 101 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 OR5AS1Q8N127 324 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 NFAM1Q8NET5 270 aaPredicted RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 SRSF8Q9BRL6 282 aaKnown RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 S1PR5Q9H228 398 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 THAP10Q9P2Z0 257 aaPredicted RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 TSSC4Q9Y5U2 329 aaPredicted RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 SMAD7O15105 426 aaKnown RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 FAHP16930 419 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 PRDX1Q06830 199 aaKnown RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 PRSS54Q6PEW0 395 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 FGFRL1Q8N441 504 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 CNEP1R1Q8N9A8 125 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 PELI1Q96FA3 418 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 MARS2Q96GW9 593 aaKnown RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 C19orf24Q9BVV8 132 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 VSIRQ9H7M9 311 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 CALHM2Q9HA72 323 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 WFDC1Q9HC57 220 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 MMP25Q9NPA2 562 aa3.1□□□□□ -1.91
GEN1-201ENST00000317402 MRM2Q9UI43 246 aaKnown RBP3.1□□□□□ -1.91
GEN1-201ENST00000317402 MPDU1O75352 247 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 OR3A4PP47883 348 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 RAC3P60763 192 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 CCL7P80098 99 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ACSF3Q4G176 576 aaPredicted RBP3.09□□□□□ -1.91
GEN1-201ENST00000317402 METRNLQ641Q3 311 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ABHD17CQ6PCB6 329 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ADAMTSL5Q6ZMM2 481 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 STPG3Q8N7X2 389 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 OR4D5Q8NGN0 318 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 OR2K2Q8NGT1 345 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ZDHHC16Q969W1 377 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.91
GEN1-201ENST00000317402 SDF2Q99470 211 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 RABAC1Q9UI14 185 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PIGLQ9Y2B2 252 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 V9GYY9 64 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TRAV8-2A0A0B4J237 113 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 C9orf170A2RU37 121 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 AGAP20933 346 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 MAS1LP35410 378 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ID1P41134 155 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 OR10D3Q8NH80 312 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 SPATA25Q9BR10 227 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 VSIG4Q9Y279 399 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 IGHV1-69-2A0A0G2JMI3 117 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PPIAL4DF5H284 164 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TUSC2O75896 110 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 CELA3AP09093 270 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 LPAR6P43657 344 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 CXCL12P48061 93 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PSG6Q00889 435 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PMP22Q01453 160 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 OR1L4Q8NGR5 311 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PRDM13Q9H4Q3 707 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TUBA4BQ9H853 241 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TMEM38BQ9NVV0 291 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PKIGQ9Y2B9 76 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.09□□□□□ -1.91
GEN1-201ENST00000317402 DSPPQ9NZW4 1301 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TRAV5A0A0B4J249 113 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 DPRXA6NFQ7 191 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 NPIPB13A6NJU9 1138 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ZNF785A8K8V0 405 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 C1QTNF9BB2RNN3 333 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 NPIPB4C9JG80 1138 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 SLC25A4P12235 298 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 CEACAM1P13688 526 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 CCR5P51681 352 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 SLC37A1P57057 533 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 LRRC75BQ2VPJ9 315 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 C5orf17Q8NAS9 161 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 PIGTQ969N2 578 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 C20orf173Q96LM9 149 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 SOSTQ9BQB4 213 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TXNIPQ9H3M7 391 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 TRBV9A0A0B4J1U6 114 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 A1L4Q6 167 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 ZNF503-AS2A6NEH8 195 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 GAGE12JA6NER3 117 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 F8VVB4 439 aa3.09□□□□□ -1.91
GEN1-201ENST00000317402 F8VWA3 439 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms