RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PDLIM3Q53GG5 364 aaPredicted RBP11.65□□□□□ -0.54
VRK3-201ENST00000316763 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 NAT8Q9UHE5 227 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 TGOLN2O43493 480 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 SMIM6P0DI80 62 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 THBS3P49746 956 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 ZNF134P52741 427 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 KIAA0141Q14154 515 aaPredicted RBP11.64□□□□□ -0.55
VRK3-201ENST00000316763 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 TMEM30BQ3MIR4 351 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 ZNF343Q6P1L6 599 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 WDR83OSQ9Y284 106 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 TNFRSF1AP19438 455 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 CD81P60033 236 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 ERVFRD-1P60508 538 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 CCL8P80075 99 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 RELBQ01201 579 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 TMEM241Q24JQ0 296 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
VRK3-201ENST00000316763 STUMQ69YW2 141 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 ZCCHC24Q8N2G6 241 aaKnown RBP11.64□□□□□ -0.55
VRK3-201ENST00000316763 OR13D1Q8NGV5 346 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 RAB24Q969Q5 203 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 DSCAMO60469 2012 aa11.64□□□□□ -0.55
VRK3-201ENST00000316763 ZNF729A6NN14 1252 aaPredicted RBP11.63□□□□□ -0.55
VRK3-201ENST00000316763 A6NNC1 897 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
VRK3-201ENST00000316763 IGHV3-7P01780 117 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 CXCL1P09341 107 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 COX6B1P14854 86 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 CDC34P49427 236 aaPredicted RBP11.63□□□□□ -0.55
VRK3-201ENST00000316763 RND2P52198 227 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 S100A12P80511 92 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 FAM201AQ5SY85 155 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 CYP2G1PQ6ZSU1 146 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 MUC15Q8N387 334 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 DDB2Q92466 427 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 IDI2-AS1Q9NZ38 188 aa11.63□□□□□ -0.55
VRK3-201ENST00000316763 TGIF2-C20orf24A0A0A6YYL0 155 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 SLC31A2O15432 143 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 KBTBD11O94819 623 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 OPN1MWP04001 364 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 OPN1MW2P0DN77 364 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 OPN1MW3P0DN78 364 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 VDAC2P45880 294 aaPredicted RBP11.62□□□□□ -0.55
VRK3-201ENST00000316763 MRPS11P82912 194 aaKnown RBP11.62□□□□□ -0.55
VRK3-201ENST00000316763 CT45A1Q5HYN5 189 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 CT45A3Q8NHU0 189 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 GAFA1Q96PS6 74 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 TMPRSS5Q9H3S3 457 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 SEC14L6B5MCN3 397 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 SELLP14151 372 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 DEFB108BQ8NET1 73 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 OR4F5Q8NH21 305 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 CORO2AQ92828 525 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 FAM210BQ96KR6 192 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 OR4F4Q96R69 305 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 SAP30LQ9HAJ7 183 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 DYNLRB1Q9NP97 96 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 KCNIP2Q9NS61 270 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
VRK3-201ENST00000316763 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 A0A1W2PPR1 153 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 A0A1W2PPV4 95 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 HRASP01112 189 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
VRK3-201ENST00000316763 OPRK1P41145 380 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 ADIRFQ15847 76 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 TMEM249Q2WGJ8 235 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 ZNF788Q6ZQV5 615 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 TGIF2LYQ8IUE0 185 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 RAB1CQ92928 201 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 LEAP2Q969E1 77 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
VRK3-201ENST00000316763 NEIL1Q96FI4 390 aaPredicted RBP11.61□□□□□ -0.55
VRK3-201ENST00000316763 CCL13Q99616 98 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 RAI1Q7Z5J4 1906 aaPredicted RBP11.61□□□□□ -0.55
VRK3-201ENST00000316763 DYSFO75923 2080 aa11.61□□□□□ -0.55
VRK3-201ENST00000316763 NKX6-3A6NJ46 265 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 GYPAP02724 150 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 TEX36Q5VZQ5 186 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 LYG1Q8N1E2 194 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 RHOVQ96L33 236 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 LINC00574Q9H8X3 128 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
VRK3-201ENST00000316763 TRAV3A0A0B4J244 114 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 RRHO14718 337 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms