RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ZNF257Q9Y2Q1 563 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM8BA6NDV4 472 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 IFNA4P05014 189 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 ICAM4Q14773 271 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 WDR25Q64LD2 544 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-201ENST00000315286 OR8B3Q8NGG8 313 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 NEU4Q8WWR8 484 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-201ENST00000315286 OR8B2Q96RD0 313 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 ENY2Q9NPA8 101 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 MIOXQ9UGB7 285 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 ARHGAP32A7KAX9 2087 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 PPIAL4CA0A0B4J2A2 164 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 TEX50A0A1B0GTY4 177 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 PPIAL4GP0DN37 164 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 RAB11AP62491 216 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 ZNF506Q5JVG8 444 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 FFAR4Q5NUL3 377 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 DTX2Q86UW9 622 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 TGIF2LXQ8IUE1 241 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 CBLN2Q8IUK8 224 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 Q8N7P7 452 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 ZNF709Q8N972 641 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 SLC24A4Q8NFF2 622 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 NEIL1Q96FI4 390 aaPredicted RBP14.9□□□□□ -0.02
CCDC43-201ENST00000315286 ACACBO00763 2458 aa14.9□□□□□ -0.02
CCDC43-201ENST00000315286 IGHV2-26A0A0B4J1V2 119 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 SMCO3A2RU48 225 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 NPY1RP25929 384 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 PRCDQ00LT1 54 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 PDPNQ86YL7 162 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 OR4C13Q8NGP0 309 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 RXFP4Q8TDU9 374 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 RAB1CQ92928 201 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 GGACTQ9BVM4 153 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 GNG13Q9P2W3 67 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 CA2P00918 260 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 SRP19P09132 144 aaKnown RBP14.89□□□□□ -0.03
CCDC43-201ENST00000315286 FBP1P09467 338 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 C8orf46Q8TAG6 207 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 TIMD4Q96H15 378 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 PLEKHA3Q9HB20 300 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 SLC39A9Q9NUM3 307 aa14.89□□□□□ -0.03
CCDC43-201ENST00000315286 CFAP46Q8IYW2 2715 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 MAP1LC3B2A6NCE7 125 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 C17orf112F2Z3M2 114 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 C19orf84I3L1E1 186 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 TREML4Q6UXN2 200 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 OR10G4Q8NGN3 311 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 OR10G9Q8NGN4 311 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 OR10G7Q8NGN6 311 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 MAP1LC3BQ9GZQ8 125 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 FKBP11Q9NYL4 201 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 WASHC3Q9Y3C0 194 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 A0A1W2PPH5 198 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 IGLV1-47P01700 117 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 MBP02144 154 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 AGAP20933 346 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 DLK1P80370 383 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 SOHLH1Q5JUK2 328 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 TNFRSF14Q92956 283 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 PCGF1Q9BSM1 259 aa14.88□□□□□ -0.03
CCDC43-201ENST00000315286 LOC102723971A0A1B0GUV8 181 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 ZFP92A6NM28 416 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 HMGB3O15347 200 aaKnown RBP14.87□□□□□ -0.03
CCDC43-201ENST00000315286 HSPB1P04792 205 aaKnown RBP14.87□□□□□ -0.03
CCDC43-201ENST00000315286 IL3RAP26951 378 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 AKIRIN2Q53H80 203 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 KHDC3LQ587J8 217 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 OR5B3Q8NH48 314 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 SLC25A22Q9H936 323 aa14.87□□□□□ -0.03
CCDC43-201ENST00000315286 C22orf46C9J442 243 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 IGLV2-23P01705 113 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 PRRX1P54821 245 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 HLA-DRB5Q30154 266 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 LY6G5BQ8NDX9 201 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 RITA1Q96K30 269 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 IGSF10Q6WRI0 2623 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 IGHV3-72A0A0B4J1Y9 119 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 MC5RP33032 325 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 CDKN1AP38936 164 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 RAB13P51153 203 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 RPL8P62917 257 aaKnown RBP14.86□□□□□ -0.03
CCDC43-201ENST00000315286 ARSJQ5FYB0 599 aaPredicted RBP14.86□□□□□ -0.03
CCDC43-201ENST00000315286 OR10W1Q8NGF6 305 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 C1orf159Q96HA4 380 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 C20orf24Q9BUV8 137 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 CLEC7AQ9BXN2 247 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 CHODLQ9H9P2 273 aa14.86□□□□□ -0.03
CCDC43-201ENST00000315286 CTXND1A0A1B0GTU2 59 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 MPDU1O75352 247 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 RBP4P02753 201 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 DEFA4P12838 97 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 USF1P22415 310 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-201ENST00000315286 COX7A1P24310 79 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 AKR1C3P42330 323 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 CEBPGP53567 150 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 AWAT1Q58HT5 328 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 FAM122CQ6P4D5 195 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 CYB561D1Q8N8Q1 229 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 TMEM167AQ8TBQ9 72 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms