RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 CMTM3Q96MX0 182 aa9.66□□□□□ -0.86
CKS2-201ENST00000314355 SRSF8Q9BRL6 282 aaKnown RBP9.66□□□□□ -0.86
CKS2-201ENST00000314355 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
CKS2-201ENST00000314355 TEX22C9J3V5 150 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 LGALS9O00182 355 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 UPK2O00526 184 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 TRAPPC2P0DI81 140 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 TRAPPC2BP0DI82 140 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 CTRB1P17538 263 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 RFX2P48378 723 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 TAS2R20P59543 309 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 CTRB2Q6GPI1 263 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 MZT2AQ6P582 158 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 IL34Q6ZMJ4 242 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 SLC16A13Q7RTY0 426 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 ISOC1Q96CN7 298 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 GPHA2Q96T91 129 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 FKBP11Q9NYL4 201 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 COMMD3Q9UBI1 195 aa9.65□□□□□ -0.86
CKS2-201ENST00000314355 TNCP24821 2201 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 GPR31O00270 319 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 RBMXL2O75526 392 aaKnown RBP9.64□□□□□ -0.87
CKS2-201ENST00000314355 NDUFB8O95169 186 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 IGHV3-23P01764 117 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 REG1AP05451 166 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 CLEC3BP05452 202 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 FGF2P09038 288 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 FOLR2P14207 255 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 AREGP15514 252 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 F2RP25116 425 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 GNRHRP30968 328 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 LPAR6P43657 344 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 BRWD1-AS2P59051 145 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 CD300EQ496F6 205 aaPredicted RBP9.64□□□□□ -0.87
CKS2-201ENST00000314355 SLC25A24Q6NUK1 477 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 PLET1Q6UQ28 207 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 OR1L6Q8NGR2 347 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 OR1L8Q8NGR8 309 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 SLC25A46Q96AG3 418 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 YIPF6Q96EC8 236 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 TMEM56Q96MV1 263 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 CITED4Q96RK1 184 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 TSC22D3Q99576 134 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 NEURL2Q9BR09 285 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 HINT2Q9BX68 163 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 QTRT1Q9BXR0 403 aaKnown RBP9.64□□□□□ -0.87
CKS2-201ENST00000314355 TMEM140Q9NV12 185 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 ADAM30Q9UKF2 790 aa9.64□□□□□ -0.87
CKS2-201ENST00000314355 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 E7EUB6 86 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 PGLYRP1O75594 196 aaPredicted RBP9.63□□□□□ -0.87
CKS2-201ENST00000314355 HLA-AP01891 365 aaKnown RBP9.63□□□□□ -0.87
CKS2-201ENST00000314355 RLN1P04808 185 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 CBLN1P23435 193 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 HLA-DMAP28067 261 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 RORCP51449 518 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 MECP2P51608 486 aaKnown RBP9.63□□□□□ -0.87
CKS2-201ENST00000314355 OR2B8PP59922 312 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 POU2AF1Q16633 256 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 DEFB114Q30KQ6 69 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 ZNF57Q68EA5 555 aaPredicted RBP9.63□□□□□ -0.87
CKS2-201ENST00000314355 RBPMS2Q6ZRY4 209 aaKnown RBP9.63□□□□□ -0.87
CKS2-201ENST00000314355 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 MARC2Q969Z3 335 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 MOB3AQ96BX8 217 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 DGCR14Q96DF8 476 aaKnown RBP9.63□□□□□ -0.87
CKS2-201ENST00000314355 SCPEP1Q9HB40 452 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 UFC1Q9Y3C8 167 aa9.63□□□□□ -0.87
CKS2-201ENST00000314355 IGLV11-55A0A075B6I3 123 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 S1PR2O95136 353 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 KRASP01116 189 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 APOA1P02647 267 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 OR13C7P0DN81 318 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 RPA2P15927 270 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 PTBP1P26599 531 aaKnown RBP eCLIP9.62□□□□□ -0.87
CKS2-201ENST00000314355 TGFBR1P36897 503 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 HAGHQ16775 308 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 CASC10Q5T4H9 136 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 C15orf40Q8WUR7 153 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 AP3S1Q92572 193 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 FANCD2OSQ96PS1 177 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 PRNDQ9UKY0 176 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 CEPT1Q9Y6K0 416 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 S4R3C0 116 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 DNAH3Q8TD57 4116 aa9.62□□□□□ -0.87
CKS2-201ENST00000314355 TEX50A0A1B0GTY4 177 aa9.61□□□□□ -0.87
CKS2-201ENST00000314355 IZUMO1RA6ND01 250 aa9.61□□□□□ -0.87
CKS2-201ENST00000314355 OR11H12B2RN74 326 aa9.61□□□□□ -0.87
CKS2-201ENST00000314355 MYOD1P15172 320 aa9.61□□□□□ -0.87
CKS2-201ENST00000314355 NAT1P18440 290 aa9.61□□□□□ -0.87
CKS2-201ENST00000314355 HRH1P35367 487 aa9.61□□□□□ -0.87
CKS2-201ENST00000314355 LAMTOR1Q6IAA8 161 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms