RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SH3BGRL3Q9H299 93 aa11.38□□□□□ -0.59
DDX54-202ENST00000314045 CEP192Q8TEP8 1941 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 COQ2Q96H96 371 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 RAMP3O60896 148 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 CLN5O75503 358 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 EIF3GO75821 320 aaKnown RBP eCLIP11.37□□□□□ -0.59
DDX54-202ENST00000314045 PLAUP00749 431 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 FAM157CP0CG43 387 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
DDX54-202ENST00000314045 Q6ZR03 302 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 RNF126Q9BV68 326 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 CRIM1Q9NZV1 1036 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 LY6HO94772 140 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 CA2P00918 260 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 IGLV1-44P01699 117 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 KHDC3LQ587J8 217 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 C2CD4CQ8TF44 421 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 C18orf12Q96KH6 178 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 C7orf69Q9H7B7 122 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 ZNF430Q9H8G1 570 aaPredicted RBP11.37□□□□□ -0.59
DDX54-202ENST00000314045 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
DDX54-202ENST00000314045 H0YIZ8 118 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 PAX5Q02548 391 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 FABP9Q0Z7S8 132 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 HEPN1Q6WQI6 88 aa11.37□□□□□ -0.59
DDX54-202ENST00000314045 IGKV3-7A0A075B6H7 116 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 CHEK1O14757 476 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 EFNA4P52798 201 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 ATP5IP56385 69 aaPredicted RBP11.36□□□□□ -0.59
DDX54-202ENST00000314045 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
DDX54-202ENST00000314045 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 RBM14Q96PK6 669 aaKnown RBP11.36□□□□□ -0.59
DDX54-202ENST00000314045 P2RX4Q99571 388 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 TRBV6-6A0A0A6YYG2 114 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 IGKV1D-33P01593 117 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 IGKV1-33P01594 117 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 TUSC1Q2TAM9 212 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 TCEAL7Q9BRU2 100 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 SEC11CQ9BY50 192 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 TGFAP01135 160 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 FHITP49789 147 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 PNRC1Q12796 327 aaPredicted RBP11.36□□□□□ -0.59
DDX54-202ENST00000314045 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 SLC16A13Q7RTY0 426 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 OR4A5Q8NH83 315 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 DKK4Q9UBT3 224 aa11.36□□□□□ -0.59
DDX54-202ENST00000314045 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.59
DDX54-202ENST00000314045 BCL2P10415 239 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 AWAT1Q58HT5 328 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 NAT8Q9UHE5 227 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 HIGD1AQ9Y241 93 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 ANKRD11Q6UB99 2663 aaPredicted RBP11.35□□□□□ -0.59
DDX54-202ENST00000314045 ZNF705GA8MUZ8 300 aaPredicted RBP11.35□□□□□ -0.59
DDX54-202ENST00000314045 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 G3V3Q6 166 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 GAMTQ14353 236 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
DDX54-202ENST00000314045 HLA-DRB5Q30154 266 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 C20orf204Q6ZNR8 217 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 C16orf82Q7Z2V1 217 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 BIVMQ86UB2 503 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 TGOLN2O43493 480 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 IGLV3-1P01715 115 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 RANP62826 216 aaKnown RBP11.35□□□□□ -0.59
DDX54-202ENST00000314045 WDR25Q64LD2 544 aaPredicted RBP11.35□□□□□ -0.59
DDX54-202ENST00000314045 LRTM2Q8N967 370 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 ID3Q02535 119 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 ZNF273Q14593 569 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 TMEM200BQ69YZ2 307 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 RPRMQ9NS64 109 aa11.35□□□□□ -0.59
DDX54-202ENST00000314045 YLPM1P49750 1951 aaKnown RBP11.34□□□□□ -0.59
DDX54-202ENST00000314045 RD3LP0DJH9 198 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 C7orf77A4D0Y5 90 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 DNASE2O00115 360 aaPredicted RBP11.34□□□□□ -0.59
DDX54-202ENST00000314045 DANCRP0C864 163 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 SAA1P0DJI8 122 aaPredicted RBP11.34□□□□□ -0.59
DDX54-202ENST00000314045 MFAP4P55083 255 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 DLK1P80370 383 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 WDR61Q9GZS3 305 aaKnown RBP11.34□□□□□ -0.59
DDX54-202ENST00000314045 AUP1Q9Y679 476 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 WISP2O76076 250 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 COL8A2P25067 703 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 BSCL2Q96G97 398 aaPredicted RBP11.34□□□□□ -0.59
DDX54-202ENST00000314045 MS4A10Q96PG2 267 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 GAFA1Q96PS6 74 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 TMEM204Q9BSN7 226 aa11.34□□□□□ -0.59
DDX54-202ENST00000314045 DBX1A6NMT0 343 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
DDX54-202ENST00000314045 SCGB2A2Q13296 93 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 SMDT1Q9H4I9 107 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 H3BQ15 152 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 PDE6DO43924 150 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms