RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 UBE2G1P62253 170 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 VAMP3Q15836 100 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 B4E171 279 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 CSN3P07498 182 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 TSPAN7P41732 249 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 MFAP2P55001 183 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 MRPS11P82912 194 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 COTL1Q14019 142 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 SNHG12Q9BXW3 62 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
CSNK1D-202ENST00000314028 LY6G6EA0A0G2JKS1 128 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 FAM90A26D6RGX4 464 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 NPVFQ9HCQ7 196 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 U3KQA8 63 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 FREM2Q5SZK8 3169 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 ORM2P19652 201 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 NUTF2P61970 127 aaKnown RBP11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 TGIF2LYQ8IUE0 185 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 STPG3Q8N7X2 389 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 SLC24A4Q8NFF2 622 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 OR2D3Q8NGH3 330 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 CXXC4Q9H2H0 198 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 SMPD2O60906 423 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 IGFBP2P18065 325 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 USF1P22415 310 aaPredicted RBP11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 OPRK1P41145 380 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 GFRA1P56159 465 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 TMEM14EPQ6UXP3 125 aa11.98□□□□□ -0.49
CSNK1D-202ENST00000314028 RAB29O14966 203 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 SIAH2O43255 324 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 ZNF137PP52743 207 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 CENPWQ5EE01 88 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 ZCCHC14Q8WYQ9 949 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 SLC35E1Q96K37 410 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 HSPB7Q9UBY9 170 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 ZNF835Q9Y2P0 537 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 J3QR06 171 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 COX7A2P2O60397 106 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 IL18BPO95998 194 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 NPSP0C0P6 89 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 COL8A2P25067 703 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 GCHFRP30047 84 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 STUMQ69YW2 141 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 RNF24Q9Y225 148 aa11.97□□□□□ -0.49
CSNK1D-202ENST00000314028 RBFOX2O43251 390 aaKnown RBP eCLIP11.96□□□□□ -0.493e-9■■■■■ 32.5
CSNK1D-202ENST00000314028 TIMP3P35625 211 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 TAS2R45P59539 299 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 PLGLAQ15195 96 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 MIR17HGQ75NE6 70 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 OR4S2Q8NH73 311 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 FOXH1O75593 365 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 APOA2P02652 100 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 Q6P435 159 aa11.96□□□□□ -0.49
CSNK1D-202ENST00000314028 DSPP15924 2871 aaKnown RBP11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.96□□□□□ -0.53e-8■■■■□ 20.1
CSNK1D-202ENST00000314028 NUPR1O60356 82 aa11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 BRS3P32247 399 aa11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 WIPI2Q9Y4P8 454 aa11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 SELENOKQ9Y6D0 94 aa11.96□□□□□ -0.5
CSNK1D-202ENST00000314028 TRGV10A0A0A0MS01 117 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 HSBP1L1C9JCN9 74 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 DKK1O94907 266 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 FOXF2Q12947 444 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 VWA1Q6PCB0 445 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 TMEM106BQ9NUM4 274 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 SLC45A2Q9UMX9 530 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 VENTXO95231 258 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 WDR86Q86TI4 376 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 SPG11Q96JI7 2443 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 A0A1W2PRD5 423 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 A0A1W2PRF3 423 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 A0A1W2PRM7 423 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 CBY3A6NI87 242 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 M0R2Z0 102 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 CDKN1AP38936 164 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 TDRG1Q3Y452 100 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 COLCA1Q6ZS62 124 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 MOB3BQ86TA1 216 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 TMEM45BQ96B21 275 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 OR2V2Q96R30 315 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 LINC00470Q9BZP3 86 aa11.95□□□□□ -0.5
CSNK1D-202ENST00000314028 TANC2Q9HCD6 1990 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms