RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 OR10J6PQ8NGY7 276 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 C5orf30Q96GV9 206 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 AMELYQ99218 206 aa6.98□□□□□ -1.29
VPS41-202ENST00000310301 MRPS16Q9Y3D3 137 aaKnown RBP6.98□□□□□ -1.29
VPS41-202ENST00000310301 PIN1P1O15428 100 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 GPR183P32249 361 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 TFPI2P48307 235 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 FGF12P61328 243 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 SELENOTP62341 195 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 CX3CL1P78423 397 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 IGKV3D-15A0A087WSY6 115 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 GCHFRP30047 84 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 CKS1BP61024 79 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 C1RLQ9NZP8 487 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 SEC16AO15027 2179 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 A0A0U1RQV5 110 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 FAM90A26D6RGX4 464 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 TBX6O95947 436 aaPredicted RBP6.97□□□□□ -1.29
VPS41-202ENST00000310301 APOHP02749 345 aaPredicted RBP6.97□□□□□ -1.29
VPS41-202ENST00000310301 MMDQ15546 238 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 SNAI3Q3KNW1 292 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 C1orf100Q5SVJ3 147 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 HCP5Q6MZN7 132 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 SMIM8Q96KF7 97 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 C16orf92Q96LL3 132 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 DMRTA2Q96SC8 542 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 PHLDA3Q9Y5J5 127 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 MSGN1A6NI15 193 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 H3BTX0 84 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 RRHO14718 337 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 KLF4O43474 513 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 UPK3AO75631 287 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 LAIR2Q6ISS4 152 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 NUDT10Q8NFP7 164 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 FRMPD3Q5JV73 1810 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 PPIAL4DF5H284 164 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 APOMO95445 188 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 Q6ZS92 163 aa6.97□□□□□ -1.29
VPS41-202ENST00000310301 IL11P20809 199 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 PRDX2P32119 198 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 DSCR9P59020 149 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 CEACAM21Q3KPI0 293 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 OR4A5Q8NH83 315 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 GPR82Q96P67 336 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 PRDM13Q9H4Q3 707 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 SEMA5BQ9P283 1151 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 DKK4Q9UBT3 224 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 ARID1AO14497 2285 aa6.96□□□□□ -1.29
VPS41-202ENST00000310301 DOCK6Q96HP0 2047 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 K7N7A8 449 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 SERF1AO75920 110 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 SRSF3P84103 164 aaKnown RBP6.96□□□□□ -1.3
VPS41-202ENST00000310301 TUBA4BQ9H853 241 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 NRN1Q9NPD7 142 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 MOB4Q9Y3A3 225 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 SMIM10L1P0DMW3 83 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 RPL27AP46776 148 aaKnown RBP6.96□□□□□ -1.3
VPS41-202ENST00000310301 IGLV3-21P80748 117 aaPredicted RBP6.96□□□□□ -1.3
VPS41-202ENST00000310301 TMEM170BQ5T4T1 132 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 UNQ9370/PRO34162Q6UXP9 181 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 SMIM10Q96HG1 83 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 RCC1LQ96I51 464 aaKnown RBP6.96□□□□□ -1.3
VPS41-202ENST00000310301 PSMG3Q9BT73 122 aaPredicted RBP6.96□□□□□ -1.3
VPS41-202ENST00000310301 AICDAQ9GZX7 198 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 RPRMQ9NS64 109 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 DTX4Q9Y2E6 619 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 MYOFQ9NZM1 2061 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 HAX1O00165 279 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 OR2H2O95918 312 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 IGKV1D-16P01601 117 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 UMODP07911 640 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 RND2P52198 227 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 ZNF658BQ4V348 819 aaPredicted RBP6.96□□□□□ -1.3
VPS41-202ENST00000310301 ZNF818PQ6ZRF7 136 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 OR13C6PQ8NH95 151 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 ZNF257Q9Y2Q1 563 aa6.96□□□□□ -1.3
VPS41-202ENST00000310301 IGKV1-8A0A0C4DH67 115 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 IL18BPO95998 194 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 MRAP2Q96G30 205 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 SDF2L1Q9HCN8 221 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 MRPS18CQ9Y3D5 142 aaKnown RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 NUP214P35658 2090 aaPredicted RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 ADMP35318 185 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 PSG9Q00887 426 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 TMEM170AQ8WVE7 144 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 ZNF385AQ96PM9 386 aaKnown RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 FOXC2Q99958 501 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 IGKV3D-11A0A0A0MRZ8 115 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 PGPEP1LA6NFU8 196 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 TMEM50AO95807 157 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 IGKV3-11P04433 115 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 LINC00614P0C842 121 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 ZNF324BQ6AW86 544 aaPredicted RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 STPG3Q8N7X2 389 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 TIMP4Q99727 224 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms