RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 J3QW42 95 aa15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 SMAD7O15105 426 aaKnown RBP15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 NPPCP23582 126 aa15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 C19orf54Q5BKX5 351 aa15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 OR4A47Q6IF82 309 aa15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 RCC1LQ96I51 464 aaKnown RBP15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 MRPL32Q9BYC8 188 aaKnown RBP15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 FLVCR1-AS1Q8TAF5 88 aa15.7■□□□□ 0.1
UBXN2A-201ENST00000309033 CGAP01215 116 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 C9orf106Q8NAJ2 232 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 DLX6P56179 175 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 COL5A1-AS1Q5SY13 56 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 WDYHV1Q96HA8 205 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 MIEN1Q9BRT3 115 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 TNFSF10P50591 281 aa15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 F11RQ9Y624 299 aaKnown RBP15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 PDCD11Q14690 1871 aaKnown RBP15.69■□□□□ 0.1
UBXN2A-201ENST00000309033 IGHV3OR16-8A0A075B7F1 116 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 IGKV1D-33P01593 117 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 IGKV1-33P01594 117 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 A0A0B4J293 547 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 CBLN1P23435 193 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 CENPVQ7Z7K6 275 aaPredicted RBP15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 GPR82Q96P67 336 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 REPIN1Q9BWE0 567 aaKnown RBP15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 IGFBP3P17936 291 aaPredicted RBP15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 ICAM4Q14773 271 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 SOD3P08294 240 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 HIST1H1AQ02539 215 aaPredicted RBP15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 LYZL4Q96KX0 146 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 PSMG3Q9BT73 122 aaPredicted RBP15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 PRR32B1ATL7 298 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 PLPPR1Q8TBJ4 325 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 FOXA2Q9Y261 457 aaPredicted RBP15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 NEUROG3Q9Y4Z2 214 aa15.68■□□□□ 0.1
UBXN2A-201ENST00000309033 CHD5Q8TDI0 1954 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 C7orf71A4D174 169 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 PRSS8Q16651 343 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 TMEM30BQ3MIR4 351 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 LAMTOR1Q6IAA8 161 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 TMEM105Q8N8V8 129 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 OR10S1Q8NGN2 331 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 MRPL20Q9BYC9 149 aaKnown RBP15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 TET1Q8NFU7 2136 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 CXorf65A6NEN9 183 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 ZNF506Q5JVG8 444 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 C1QTNF12Q5T7M4 302 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 PET117Q6UWS5 81 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 RAX2Q96IS3 184 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 IFI27L2Q9H2X8 130 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 LOC107984156A0A0G2JMH3 177 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 A1L4Q6 167 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 LHX2P50458 406 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 RPS20P60866 119 aaKnown RBP15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 ARL17AQ8IVW1 177 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 C19orf24Q9BVV8 132 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 RALGAPA2Q2PPJ7 1873 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 MUC21A0A0G2JKD1 596 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 MUC21A0A140T8X8 626 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 NPIPB6E9PJ23 425 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 SLC17A3O00476 420 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 TRGV3P03979 118 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 MUC21Q5SSG8 566 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 GP6Q9HCN6 339 aa15.67■□□□□ 0.1
UBXN2A-201ENST00000309033 NYNRINQ9P2P1 1898 aaKnown RBP15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 ZNF56Q15929 161 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 ZNF883P0CG24 379 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 EFNB1P98172 346 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 C21orf62-AS1Q17RA5 79 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 IGKV3OR2-268A0A0C4DH90 116 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 RBFOX2O43251 390 aaKnown RBP eCLIP15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 GATA2P23769 480 aaPredicted RBP15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 DEPPQ9NTK1 212 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 KBTBD11-OT1A0A1B0GTJ5 212 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 PQLC2LA1A4F0 135 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 LYPD3O95274 346 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 FAM57AQ8TBR7 257 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 GALNT14Q96FL9 552 aa15.66■□□□□ 0.1
UBXN2A-201ENST00000309033 SCO2A0A1W2PP80 73 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 FOXH1O75593 365 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 TRAV14DV4A0A0A6YYC5 116 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 BIVMQ86UB2 503 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 RAXQ9Y2V3 346 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 SVILO95425 2214 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 CACNA1IQ9P0X4 2223 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 GATAD1Q8WUU5 269 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 UCP1P25874 307 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 FOXA3P55318 350 aaPredicted RBP15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 HIST1H4GQ99525 98 aa15.65■□□□□ 0.1
UBXN2A-201ENST00000309033 PINLYPA6NC86 204 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 FAM181BA6NEQ2 426 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 FOLR2P14207 255 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 PMCHL1Q16048 86 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 LOC285556D6RIA3 1793 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 ATP5G3P48201 142 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 CDX1P47902 265 aaPredicted RBP15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 RNF222A6NCQ9 220 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 STAG3L2P0CL84 134 aa15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 MRPL13Q9BYD1 178 aaKnown RBP15.64■□□□□ 0.09
UBXN2A-201ENST00000309033 LCTP09848 1927 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms