RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 NXPH3O95157 252 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CFDP00746 253 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IFNA17P01571 189 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 VDAC2P45880 294 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 NHLH2Q02577 135 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 EBI3Q14213 229 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ST8SIA2Q92186 375 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ZNF471Q9BX82 626 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 FBXL17Q9UF56 701 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TCF19Q9Y242 345 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MTORP42345 2549 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IGHV3-72A0A0B4J1Y9 119 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CEBPZOSA8MTT3 80 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 INS-IGF2F8WCM5 200 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 JTBO76095 146 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SCAF4O95104 1147 aaKnown RBP10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 VENTXO95231 258 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SPDEFO95238 335 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TGFAP01135 160 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IAPPP10997 89 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SULT1A1P50225 295 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 OR2B8PP59922 312 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 UBAC2Q8NBM4 344 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ARV1Q9H2C2 271 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 OR51B2Q9Y5P1 312 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 AUP1Q9Y679 476 aa10.3□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 J3QLI3 93 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 NPFFO15130 113 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 AVPP01185 164 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TPT1P13693 172 aaKnown RBP10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ATP5IP56385 69 aaPredicted RBP10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RPL8P62917 257 aaKnown RBP10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 EXOSC2Q13868 293 aaKnown RBP10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PSG5Q15238 335 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 STX12Q86Y82 276 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 THNSL2Q86YJ6 484 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 LURAP1LQ8IV03 231 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 BAP18Q8IXM2 172 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 BSCL2Q96G97 398 aaPredicted RBP10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RITA1Q96K30 269 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 NUP50Q9UKX7 468 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 HILPDAQ9Y5L2 63 aa10.29□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IGHV1-69DA0A0B4J2H0 117 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TEX50A0A1B0GTY4 177 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SMAD7O15105 426 aaKnown RBP10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MOSP00540 346 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IGHV1-69P01742 117 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MAS1LP35410 378 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RPP30P78346 268 aaKnown RBP10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PRCDQ00LT1 54 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SSX2Q16385 188 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MRGPRG-AS1Q2M3A8 158 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SPNS3Q6ZMD2 512 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PDZD9Q8IXQ8 264 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 DYNAPQ8N1N2 210 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 NPBQ8NG41 125 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 OR1L8Q8NGR8 309 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SCARB1Q8WTV0 552 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CLCC1Q96S66 551 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 HIPK2Q9H2X6 1198 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 C7orf69Q9H7B7 122 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 WFDC1Q9HC57 220 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 STRAPQ9Y3F4 350 aaKnown RBP10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ABCA1O95477 2261 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 BORCS7-ASMTA0A0B4J1R7 106 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 A0A1W2PRD5 423 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 A0A1W2PRF3 423 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 A0A1W2PRM7 423 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SLC25A17O43808 307 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SAA4P35542 130 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SPANXN5Q5MJ07 72 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RPL7L1Q6DKI1 246 aaKnown RBP10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MMD2Q8IY49 270 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 OR2T10Q8NGZ9 312 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RBMXL1Q96E39 390 aaKnown RBP10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 NDUFA4L2Q9NRX3 87 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SIGLEC9Q9Y336 463 aa10.28□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ANK3Q12955 4377 aaKnown RBP10.27□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 DFFBO76075 338 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 CST7O76096 145 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 NDUFA3O95167 84 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 FSHBP01225 129 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 HBG1P69891 147 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 HBG2P69892 147 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 ZNF266Q14584 549 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 PRSS8Q16651 343 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 KLF17Q5JT82 389 aaPredicted RBP10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 Q8N6K4 173 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 OR1S2Q8NGQ3 325 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 EAF1Q96JC9 268 aaPredicted RBP10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 OR4C12Q96R67 309 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 COMMD5Q9GZQ3 224 aa10.27□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms