RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 C5orf66Q9H5L9 145 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SLA2Q9H6Q3 261 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 AKIP1Q9NQ31 210 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 KCNIP3Q9Y2W7 256 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 LINC00854A0A1B0GVQ3 168 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CRYM-AS1A6NIL9 109 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ADARB2-AS1A8MUL3 147 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RBMXL2O75526 392 aaKnown RBP8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TRGV3P03979 118 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FGF2P09038 288 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR5AC1P0C628 307 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR9G9P0C7N8 305 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ANXA3P12429 323 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CDX1P47902 265 aaPredicted RBP8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RAB9AP51151 201 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 DHODHQ02127 395 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SP6Q3SY56 376 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 THOC7Q6I9Y2 204 aaKnown RBP8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 C8orf86Q6ZUL3 223 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TMED4Q7Z7H5 227 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR5T1Q8NG75 326 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR4A16Q8NH70 328 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 UBE2E2Q96LR5 201 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MS4A10Q96PG2 267 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SDHCQ99643 169 aaPredicted RBP8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RTBDNQ9BSG5 229 aaPredicted RBP8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FKBP11Q9NYL4 201 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PRNDQ9UKY0 176 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 VSIG4Q9Y279 399 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ANK2Q01484 3957 aa8.59□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SOX15O60248 233 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 DHFRP00374 187 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 AKR1C4P17516 323 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 UCP1P25874 307 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR2B8PP59922 312 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ASPHD1Q5U4P2 390 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CADM3Q8N126 398 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ZNF491Q8N8L2 437 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CASTOR1Q8WTX7 329 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PDCD10Q9BUL8 212 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 QTRT1Q9BXR0 403 aaKnown RBP8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 KLK15Q9H2R5 256 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR51B2Q9Y5P1 312 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 WNK1Q9H4A3 2382 aa8.58□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TRAV3A0A0B4J244 114 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PIGBOS1A0A0B4J2F0 54 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 A0A0G2JLM5 398 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 C13orf42A0A1B0GVH6 325 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CYB5BO43169 146 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IGKV1-39P01597 117 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IGKV1D-39P04432 117 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 DEFA4P12838 97 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CD33P20138 364 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 MECP2P51608 486 aaKnown RBP8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 C18orf65Q6ZTR6 163 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ADAD2Q8NCV1 583 aaKnown RBP8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR1L8Q8NGR8 309 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 MYOZ3Q8TDC0 251 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 RBPMSQ93062 196 aaKnown RBP8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 HINT2Q9BX68 163 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM222Q9H0R3 208 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ZNF257Q9Y2Q1 563 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 NPIPB5A8MRT5 1133 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TRAPPC2P0DI81 140 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TRAPPC2BP0DI82 140 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 MYOD1P15172 320 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 VAMP1P23763 118 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 MYCNOSP40205 109 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CCR6P51684 374 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 RAB25P57735 213 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SRPXP78539 464 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 DEFB136Q30KP8 78 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM128Q5BJH2 165 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM268Q5VZI3 342 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 HSD17B13Q7Z5P4 300 aaPredicted RBP8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 FAM219AQ8IW50 185 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TTC9CQ8N5M4 171 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR5B3Q8NH48 314 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 DPF1Q92782 380 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LSM10Q969L4 123 aaKnown RBP8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM230Q96A57 120 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 GALNT14Q96FL9 552 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM56Q96MV1 263 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR5B12Q96R08 314 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 GNB4Q9HAV0 340 aa8.56□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TEX50A0A1B0GTY4 177 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms