RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 C11orf42Q8N5U0 333 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 SAP30LQ9HAJ7 183 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 WNK2Q9Y3S1 2297 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 CGAP01215 116 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 IGKV1-5P01602 117 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 HLA-DQA1P01909 254 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 ZNF497Q6ZNH5 498 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 AMBPP02760 352 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 CEACAM1P13688 526 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 CD82P27701 267 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
DDX54-201ENST00000306014 Q6ZRM9 215 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 TMEM191AQ9H0A3 160 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 CUL9Q8IWT3 2517 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 ISLRO14498 428 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 NDUFAF3Q9BU61 184 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 SEMA5BQ9P283 1151 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 CADP27708 2225 aa11.17□□□□□ -0.62
DDX54-201ENST00000306014 CA2P00918 260 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 CD99P14209 185 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 ZFHX2Q9C0A1 2572 aaPredicted RBP11.16□□□□□ -0.62
DDX54-201ENST00000306014 GFRA3O60609 400 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 TMEM50AO95807 157 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 PERPQ96FX8 193 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 SLC25A10Q9UBX3 287 aaPredicted RBP11.16□□□□□ -0.62
DDX54-201ENST00000306014 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 PRR33A8MZF0 331 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 LILRA1O75019 489 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 IL15RAQ13261 267 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 GFRALQ6UXV0 394 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 GSX1Q9H4S2 264 aaPredicted RBP11.16□□□□□ -0.62
DDX54-201ENST00000306014 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 J3QW42 95 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 SIAH2O43255 324 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 RSPO1Q2MKA7 263 aaPredicted RBP11.16□□□□□ -0.62
DDX54-201ENST00000306014 HCP5Q6MZN7 132 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 ASCL3Q9NQ33 180 aa11.16□□□□□ -0.62
DDX54-201ENST00000306014 IGFBP2P18065 325 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 RPL8P62917 257 aaKnown RBP11.15□□□□□ -0.62
DDX54-201ENST00000306014 CTAG1AP78358 180 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 FAM201AQ5SY85 155 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 C20orf204Q6ZNR8 217 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 GCSAMQ8N6F7 178 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 TICRRQ7Z2Z1 1910 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 TRGV8A0A0C4DH27 118 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 Q6ZT83 130 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 OR5R1Q8NH85 324 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
DDX54-201ENST00000306014 BMPR1BO00238 502 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 ACP1P24666 158 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 ZCCHC14Q8WYQ9 949 aaKnown RBP11.15□□□□□ -0.62
DDX54-201ENST00000306014 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
DDX54-201ENST00000306014 AMMECR1Q9Y4X0 333 aaPredicted RBP11.15□□□□□ -0.62
DDX54-201ENST00000306014 ETV2O00321 342 aaPredicted RBP11.14□□□□□ -0.63
DDX54-201ENST00000306014 CECR9P0C854 216 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 GATA2P23769 480 aaPredicted RBP11.14□□□□□ -0.63
DDX54-201ENST00000306014 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 FAM90A2PQ658T7 463 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 ASCL4Q6XD76 172 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 FOXL2NBQ6ZUU3 175 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 IL36BQ9NZH7 164 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 HSPB7Q9UBY9 170 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 CENPFP49454 3210 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 RPL11P62913 178 aaKnown RBP11.14□□□□□ -0.63
DDX54-201ENST00000306014 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 MRPS18CQ9Y3D5 142 aaKnown RBP11.14□□□□□ -0.63
DDX54-201ENST00000306014 A0A1W2PRD5 423 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 A0A1W2PRF3 423 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 A0A1W2PRM7 423 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 PGPA6NDG6 321 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 FAM157AC9JC47 383 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
DDX54-201ENST00000306014 RND2P52198 227 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 MUC6Q6W4X9 2439 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 IFNL4K9M1U5 179 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 SERF1AO75920 110 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 IGHV1-2P23083 117 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 MAP1LC3CQ9BXW4 147 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 PPP1R14DQ9NXH3 145 aa11.14□□□□□ -0.63
DDX54-201ENST00000306014 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
DDX54-201ENST00000306014 H3BTX0 84 aa11.13□□□□□ -0.63
DDX54-201ENST00000306014 CLEC3BP05452 202 aa11.13□□□□□ -0.63
DDX54-201ENST00000306014 RPL30P62888 115 aaKnown RBP11.13□□□□□ -0.63
DDX54-201ENST00000306014 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDX54-201ENST00000306014 FAM122AQ96E09 287 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms